STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABY23197.1Integral membrane transport protein. (109 aa)    
Predicted Functional Partners:
ABY23198.1
Integral membrane transport protein; Partial, C-terminus.
     0.991
ABY23196.1
Integral membrane transport protein; Partial, N-terminus.
     0.989
ABY23195.1
ABC transporter, ATP-binding protein.
 
  
 0.830
pspC.2
Putative stress-responsive transcriptional regulator.
 
    0.672
ABY23192.1
Conserved hypothetical protein.
 
     0.610
ABY23781.1
acyl-CoA dehydrogenase; Partial, C-terminus.
  
     0.545
ABY23002.1
Phage shock protein A.
 
    0.540
ABY23200.1
Hypothetical conserved protein.
       0.521
ABY23782.1
acyl-CoA dehydrogenase.
  
     0.520
nagB
Glucosamine-6-phosphate isomerase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion; Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. NagB subfamily.
       0.489
Your Current Organism:
Renibacterium salmoninarum
NCBI taxonomy Id: 288705
Other names: R. salmoninarum ATCC 33209, Renibacterium salmoninarum ATCC 33209, Renibacterium salmoninarum str. ATCC 33209, Renibacterium salmoninarum strain ATCC 33209
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