STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABY23354.1UDP-galactopyranose mutase. (394 aa)    
Predicted Functional Partners:
capF
Putative capsular polysaccharide synthesis enzyme.
  
  
 0.994
glfT
Bifunctional udp-galactofuranosyl transferase.
 
  
 0.972
ABY25026.1
Hypothetical membrane protein.
 
  
 0.946
ABY23352.1
Polysaccharide export ABC transporter permease protein.
 
  
 0.930
ABY22915.1
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
    
 0.922
ABY24776.1
Galactose-1-phosphate uridylyltransferase.
    
 0.911
ABY23349.1
Hypothetical membrane protein.
 
   
 0.904
ABY23351.1
ABC-type polysaccharide/polyol phosphate transport system, ATPase component.
 
  
 0.887
ABY23347.1
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
  
 0.833
ABY23172.1
Glycosyl transferase family 2.
 
  
 0.826
Your Current Organism:
Renibacterium salmoninarum
NCBI taxonomy Id: 288705
Other names: R. salmoninarum ATCC 33209, Renibacterium salmoninarum ATCC 33209, Renibacterium salmoninarum str. ATCC 33209, Renibacterium salmoninarum strain ATCC 33209
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.