STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABY23359.1NAD-specific glutamate dehydrogenase. (1626 aa)    
Predicted Functional Partners:
ABY24256.1
Hypothetical signal transduction protein.
    
 
 0.989
ABY24173.1
Glutamine synthetase.
     
 0.949
ABY22350.1
Glutamine synthetase.
     
 0.942
ABY24189.1
Glutamine synthetase.
     
 0.941
ABY23674.1
Proline dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.915
ABY24059.1
Glutamate synthase [NADPH] large chain; Partial, C-terminus.
     
 0.910
ABY23810.1
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
     
 0.908
ABY24058.1
Glutamate synthase [NADPH] small chain.
     
 0.908
ABY22405.1
Aspartate aminotransferase.
     
 0.901
ABY22886.1
Aspartate/alanine aminotransferase.
     
 0.901
Your Current Organism:
Renibacterium salmoninarum
NCBI taxonomy Id: 288705
Other names: R. salmoninarum ATCC 33209, Renibacterium salmoninarum ATCC 33209, Renibacterium salmoninarum str. ATCC 33209, Renibacterium salmoninarum strain ATCC 33209
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