STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABY23395.1Dipeptide transport ATP-binding protein; Partial, C-terminus; Belongs to the ABC transporter superfamily. (382 aa)    
Predicted Functional Partners:
dppC.3
Dipeptide transport system permease protein; Partial, N-terminus.
     0.990
ABY23396.1
Dipeptide transport ATP-binding protein; Partial, N-terminus.
   
0.971
dppC.4
Dipeptide transport system permease protein; Partial, C-terminus.
     0.971
oppC
Oligopeptide transporter, permease protein.
     0.968
dppB.3
Dipeptide transport system permease protein; Partial, C-terminus.
     0.915
dppB.2
Dipeptide transport system permease protein.
     0.770
dppC.1
Dipeptide transport system permease protein.
     0.754
dppC.2
Dipeptide transport system permease protein; Partial, C-terminus.
 
     0.741
ABY25241.1
Dipeptide transport system permease protein; Partial, C-terminus.
 
     0.736
dppB.6
Dipeptide transport system permease protein.
     0.724
Your Current Organism:
Renibacterium salmoninarum
NCBI taxonomy Id: 288705
Other names: R. salmoninarum ATCC 33209, Renibacterium salmoninarum ATCC 33209, Renibacterium salmoninarum str. ATCC 33209, Renibacterium salmoninarum strain ATCC 33209
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.