Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABY23396.1 | ABY23401.1 | RSal33209_1660 | RSal33209_1665 | Dipeptide transport ATP-binding protein; Partial, N-terminus. | OrfA; IS994. | 0.467 |
ABY23396.1 | ABY23402.1 | RSal33209_1660 | RSal33209_1666 | Dipeptide transport ATP-binding protein; Partial, N-terminus. | OrfB; IS994. | 0.461 |
ABY23396.1 | dppB.3 | RSal33209_1660 | RSal33209_1663 | Dipeptide transport ATP-binding protein; Partial, N-terminus. | Dipeptide transport system permease protein; Partial, C-terminus. | 0.963 |
ABY23396.1 | dppB.4 | RSal33209_1660 | RSal33209_1664 | Dipeptide transport ATP-binding protein; Partial, N-terminus. | Dipeptide transport system permease protein. | 0.823 |
ABY23396.1 | dppC.2 | RSal33209_1660 | RSal33209_1661 | Dipeptide transport ATP-binding protein; Partial, N-terminus. | Dipeptide transport system permease protein; Partial, C-terminus. | 0.877 |
ABY23396.1 | dppC.3 | RSal33209_1660 | RSal33209_1662 | Dipeptide transport ATP-binding protein; Partial, N-terminus. | Dipeptide transport system permease protein; Partial, N-terminus. | 0.985 |
ABY23401.1 | ABY23396.1 | RSal33209_1665 | RSal33209_1660 | OrfA; IS994. | Dipeptide transport ATP-binding protein; Partial, N-terminus. | 0.467 |
ABY23401.1 | ABY23402.1 | RSal33209_1665 | RSal33209_1666 | OrfA; IS994. | OrfB; IS994. | 0.768 |
ABY23401.1 | dppB.3 | RSal33209_1665 | RSal33209_1663 | OrfA; IS994. | Dipeptide transport system permease protein; Partial, C-terminus. | 0.467 |
ABY23401.1 | dppB.4 | RSal33209_1665 | RSal33209_1664 | OrfA; IS994. | Dipeptide transport system permease protein. | 0.533 |
ABY23401.1 | dppC.2 | RSal33209_1665 | RSal33209_1661 | OrfA; IS994. | Dipeptide transport system permease protein; Partial, C-terminus. | 0.467 |
ABY23401.1 | dppC.3 | RSal33209_1665 | RSal33209_1662 | OrfA; IS994. | Dipeptide transport system permease protein; Partial, N-terminus. | 0.467 |
ABY23402.1 | ABY23396.1 | RSal33209_1666 | RSal33209_1660 | OrfB; IS994. | Dipeptide transport ATP-binding protein; Partial, N-terminus. | 0.461 |
ABY23402.1 | ABY23401.1 | RSal33209_1666 | RSal33209_1665 | OrfB; IS994. | OrfA; IS994. | 0.768 |
ABY23402.1 | dppB.3 | RSal33209_1666 | RSal33209_1663 | OrfB; IS994. | Dipeptide transport system permease protein; Partial, C-terminus. | 0.461 |
ABY23402.1 | dppB.4 | RSal33209_1666 | RSal33209_1664 | OrfB; IS994. | Dipeptide transport system permease protein. | 0.526 |
ABY23402.1 | dppC.2 | RSal33209_1666 | RSal33209_1661 | OrfB; IS994. | Dipeptide transport system permease protein; Partial, C-terminus. | 0.461 |
ABY23402.1 | dppC.3 | RSal33209_1666 | RSal33209_1662 | OrfB; IS994. | Dipeptide transport system permease protein; Partial, N-terminus. | 0.461 |
dppB.3 | ABY23396.1 | RSal33209_1663 | RSal33209_1660 | Dipeptide transport system permease protein; Partial, C-terminus. | Dipeptide transport ATP-binding protein; Partial, N-terminus. | 0.963 |
dppB.3 | ABY23401.1 | RSal33209_1663 | RSal33209_1665 | Dipeptide transport system permease protein; Partial, C-terminus. | OrfA; IS994. | 0.467 |
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