Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABY23131.1 | ABY23408.1 | RSal33209_1394 | RSal33209_1672 | Inosine-5'-monophosphate dehydrogenase. | GMP synthase (glutamine-hydrolyzing). | 0.538 |
ABY23131.1 | ABY23499.1 | RSal33209_1394 | RSal33209_1764 | Inosine-5'-monophosphate dehydrogenase. | GMP reductase. | 0.907 |
ABY23131.1 | guaB | RSal33209_1394 | RSal33209_1765 | Inosine-5'-monophosphate dehydrogenase. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.932 |
ABY23131.1 | pheT | RSal33209_1394 | RSal33209_0761 | Inosine-5'-monophosphate dehydrogenase. | phenylalanyl-tRNA synthetase beta chain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.711 |
ABY23131.1 | purA | RSal33209_1394 | RSal33209_3390 | Inosine-5'-monophosphate dehydrogenase. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.968 |
ABY23408.1 | ABY23131.1 | RSal33209_1672 | RSal33209_1394 | GMP synthase (glutamine-hydrolyzing). | Inosine-5'-monophosphate dehydrogenase. | 0.538 |
ABY23408.1 | ABY23410.1 | RSal33209_1672 | RSal33209_1674 | GMP synthase (glutamine-hydrolyzing). | Selenocysteine lyase. | 0.574 |
ABY23408.1 | ABY23499.1 | RSal33209_1672 | RSal33209_1764 | GMP synthase (glutamine-hydrolyzing). | GMP reductase. | 0.672 |
ABY23408.1 | argS | RSal33209_1672 | RSal33209_1427 | GMP synthase (glutamine-hydrolyzing). | arginyl-tRNA synthetase. | 0.565 |
ABY23408.1 | guaB | RSal33209_1672 | RSal33209_1765 | GMP synthase (glutamine-hydrolyzing). | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.815 |
ABY23408.1 | mnmA | RSal33209_1672 | RSal33209_1673 | GMP synthase (glutamine-hydrolyzing). | tRNA methyl transferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. | 0.605 |
ABY23408.1 | pheT | RSal33209_1672 | RSal33209_0761 | GMP synthase (glutamine-hydrolyzing). | phenylalanyl-tRNA synthetase beta chain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.734 |
ABY23408.1 | purA | RSal33209_1672 | RSal33209_3390 | GMP synthase (glutamine-hydrolyzing). | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.534 |
ABY23408.1 | rimM | RSal33209_1672 | RSal33209_1083 | GMP synthase (glutamine-hydrolyzing). | 16S rRNA processing protein; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family. | 0.527 |
ABY23408.1 | rplK | RSal33209_1672 | RSal33209_0988 | GMP synthase (glutamine-hydrolyzing). | LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.568 |
ABY23410.1 | ABY23408.1 | RSal33209_1674 | RSal33209_1672 | Selenocysteine lyase. | GMP synthase (glutamine-hydrolyzing). | 0.574 |
ABY23410.1 | mnmA | RSal33209_1674 | RSal33209_1673 | Selenocysteine lyase. | tRNA methyl transferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. | 0.886 |
ABY23499.1 | ABY23131.1 | RSal33209_1764 | RSal33209_1394 | GMP reductase. | Inosine-5'-monophosphate dehydrogenase. | 0.907 |
ABY23499.1 | ABY23408.1 | RSal33209_1764 | RSal33209_1672 | GMP reductase. | GMP synthase (glutamine-hydrolyzing). | 0.672 |
ABY23499.1 | guaB | RSal33209_1764 | RSal33209_1765 | GMP reductase. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.980 |
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