STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABY23536.1Methylmalonate-semialdehyde dehydrogenase (acylating). (498 aa)    
Predicted Functional Partners:
ABY23535.1
4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.981
ABY24329.1
4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 0.936
ABY24694.1
3-hydroxyisobutyrate dehydrogenase.
 
  0.929
ABY23582.1
3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family.
 
  0.928
ABY22568.1
2-methylcitrate synthase; Belongs to the citrate synthase family.
  
 0.927
ABY23579.1
Acetyl-coenzyme A synthetase; Partial, C-terminus.
   
  0.925
ABY24493.1
Acetyl-coenzyme A synthetase; Partial, C-terminus.
   
  0.925
ABY25149.1
delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase; 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 0.917
igiB.1
IgiB; Partial, C-terminus.
  
 
  0.912
ABY23806.1
Acyl-coenzyme A oxidase.
   
  0.911
Your Current Organism:
Renibacterium salmoninarum
NCBI taxonomy Id: 288705
Other names: R. salmoninarum ATCC 33209, Renibacterium salmoninarum ATCC 33209, Renibacterium salmoninarum str. ATCC 33209, Renibacterium salmoninarum strain ATCC 33209
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