STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABY23544.1Proline iminopeptidase. (424 aa)    
Predicted Functional Partners:
ABY23551.1
Proline racemase; Belongs to the proline racemase family.
 
  
  0.936
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
    
  0.903
ABY23674.1
Proline dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
 0.902
ABY21852.1
Proline iminopeptidase; Belongs to the peptidase S33 family.
     
  0.900
ABY22234.1
Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
 
      0.808
ABY24265.1
Heterocyst glycolipid synthase.
  
 
 0.633
ABY23549.1
Opine oxidase; Partial, N-terminus.
 
     0.603
ABY23545.1
Transcriptional regulator, GntR family.
 
     0.568
ABY23552.1
Dihydrodipicolinate synthase; Belongs to the DapA family.
 
     0.548
ABY23550.1
Sarcosine oxidase beta subunit.
 
 
   0.517
Your Current Organism:
Renibacterium salmoninarum
NCBI taxonomy Id: 288705
Other names: R. salmoninarum ATCC 33209, Renibacterium salmoninarum ATCC 33209, Renibacterium salmoninarum str. ATCC 33209, Renibacterium salmoninarum strain ATCC 33209
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.