STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABY23567.1Quinone oxidoreductase. (309 aa)    
Predicted Functional Partners:
ABY24265.1
Heterocyst glycolipid synthase.
  
 
 0.729
ABY22520.1
Quinone oxidoreductase; Partial, C-terminus.
  
     0.724
ABY23566.1
Transcriptional regulator, TetR family.
 
     0.714
ABY22064.1
Dehydrogenase.
  
     0.621
ABY24266.1
Heterocyst glycolipid synthase; Belongs to the P-Pant transferase superfamily.
  
 
 0.467
ABY22068.1
Zinc-binding dehydrogenase.
 
  
 0.437
Your Current Organism:
Renibacterium salmoninarum
NCBI taxonomy Id: 288705
Other names: R. salmoninarum ATCC 33209, Renibacterium salmoninarum ATCC 33209, Renibacterium salmoninarum str. ATCC 33209, Renibacterium salmoninarum strain ATCC 33209
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.