STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABY23758.1Amidohydrolase family. (548 aa)    
Predicted Functional Partners:
tatA
Sec-independent protein translocase protein.
 
     0.670
ABY23759.1
ATP-dependent DNA helicase.
      0.654
tatC
Sec-independent protein translocase protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.
       0.566
ABY22445.1
Hypothetical membrane protein.
  
     0.538
ABY22059.1
Succinate dehydrogenase membrane anchor subunit.
  
     0.490
ABY23698.1
Conserved hypothetical protein.
 
     0.478
ABY22058.1
Succinate dehydrogenase cytochrome b556 subunit.
  
     0.460
ABY24740.1
Conserved hypothetical protein.
 
    0.458
ABY23762.1
Conserved hypothetical protein.
       0.454
Your Current Organism:
Renibacterium salmoninarum
NCBI taxonomy Id: 288705
Other names: R. salmoninarum ATCC 33209, Renibacterium salmoninarum ATCC 33209, Renibacterium salmoninarum str. ATCC 33209, Renibacterium salmoninarum strain ATCC 33209
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.