Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABY22552.1 | ABY23023.1 | RSal33209_0808 | RSal33209_1286 | Conserved hypothetical protein. | Chaperone protein DnaJ domain, putative. | 0.806 |
ABY22552.1 | ABY25257.1 | RSal33209_0808 | RSal33209_3548 | Conserved hypothetical protein. | Hypothetical protein. | 0.734 |
ABY22552.1 | dnaJ | RSal33209_0808 | RSal33209_1907 | Conserved hypothetical protein. | Chaperone protein. | 0.806 |
ABY22552.1 | dnaJ.2 | RSal33209_0808 | RSal33209_1926 | Conserved hypothetical protein. | Chaperone protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK a [...] | 0.806 |
ABY22552.1 | dnaK | RSal33209_0808 | RSal33209_1909 | Conserved hypothetical protein. | Chaperone protein; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.966 |
ABY22552.1 | guaB | RSal33209_0808 | RSal33209_1765 | Conserved hypothetical protein. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.472 |
ABY22552.1 | htpG | RSal33209_0808 | RSal33209_2188 | Conserved hypothetical protein. | Chaperone protein. | 0.981 |
ABY23023.1 | ABY22552.1 | RSal33209_1286 | RSal33209_0808 | Chaperone protein DnaJ domain, putative. | Conserved hypothetical protein. | 0.806 |
ABY23023.1 | ABY25257.1 | RSal33209_1286 | RSal33209_3548 | Chaperone protein DnaJ domain, putative. | Hypothetical protein. | 0.692 |
ABY23023.1 | dnaJ | RSal33209_1286 | RSal33209_1907 | Chaperone protein DnaJ domain, putative. | Chaperone protein. | 0.668 |
ABY23023.1 | dnaK | RSal33209_1286 | RSal33209_1909 | Chaperone protein DnaJ domain, putative. | Chaperone protein; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.977 |
ABY23023.1 | groL1 | RSal33209_1286 | RSal33209_0482 | Chaperone protein DnaJ domain, putative. | Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.712 |
ABY23023.1 | groL2 | RSal33209_1286 | RSal33209_1768 | Chaperone protein DnaJ domain, putative. | 60 kDa chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.751 |
ABY23023.1 | htpG | RSal33209_1286 | RSal33209_2188 | Chaperone protein DnaJ domain, putative. | Chaperone protein. | 0.925 |
ABY23919.1 | ABY25257.1 | RSal33209_2187 | RSal33209_3548 | Conserved hypothetical protein. | Hypothetical protein. | 0.452 |
ABY23919.1 | dnaK | RSal33209_2187 | RSal33209_1909 | Conserved hypothetical protein. | Chaperone protein; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.617 |
ABY23919.1 | htpG | RSal33209_2187 | RSal33209_2188 | Conserved hypothetical protein. | Chaperone protein. | 0.958 |
ABY25257.1 | ABY22552.1 | RSal33209_3548 | RSal33209_0808 | Hypothetical protein. | Conserved hypothetical protein. | 0.734 |
ABY25257.1 | ABY23023.1 | RSal33209_3548 | RSal33209_1286 | Hypothetical protein. | Chaperone protein DnaJ domain, putative. | 0.692 |
ABY25257.1 | ABY23919.1 | RSal33209_3548 | RSal33209_2187 | Hypothetical protein. | Conserved hypothetical protein. | 0.452 |
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