STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABY24055.1NADH-dependent flavin oxidoreductase. (422 aa)    
Predicted Functional Partners:
ABY24285.1
2,4-dienoyl-CoA reductase (NADPH); Partial, C-terminus.
 
  
 0.919
ABY23011.1
Electron transfer flavoprotein beta-subunit.
  
 
 0.598
ABY25148.1
Electron transfer flavoprotein beta-subunit.
  
 
 0.598
ABY22162.1
Transcriptional regulator.
   
    0.540
ABY23012.1
Electron transfer flavoprotein alpha-subunit.
   
 
 0.500
ABY25147.1
Electron transfer flavoprotein alpha-subunit.
   
 
 0.500
tuf
Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
    0.493
ABY24030.1
SSU ribosomal protein S1P.
   
    0.483
ABY22229.1
Cold shock protein.
   
    0.468
ABY23187.1
Cold shock protein.
   
    0.468
Your Current Organism:
Renibacterium salmoninarum
NCBI taxonomy Id: 288705
Other names: R. salmoninarum ATCC 33209, Renibacterium salmoninarum ATCC 33209, Renibacterium salmoninarum str. ATCC 33209, Renibacterium salmoninarum strain ATCC 33209
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.