STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
paaDPhenylacetic acid degradation protein. (168 aa)    
Predicted Functional Partners:
ABY24383.1
phenylacetyl-CoA 2-monooxygenase electron transfer component.
 
 0.999
paaB
Phenylacetic acid degradation protein.
 
 0.999
paaC
Phenylacetic acid degradation protein.
 
 0.997
paaA
Phenylacetic acid degradation protein.
 
 
 0.996
paaI
Phenylacetic acid degradation protein.
 
 
 0.981
ABY24398.1
Coenzyme F390 synthetase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
  
 0.950
ABY24406.1
2-hydroxyphenylacetyl-CoA ring opening enzyme.
 
  
 0.788
ABY24405.1
2-hydroxyphenylacetyl-CoA ring opening enzyme; Partial, C-terminus.
 
  
 0.771
ABY24382.1
enoyl-CoA hydratase.
  
  
 0.735
iscU
IscU.
  
    0.563
Your Current Organism:
Renibacterium salmoninarum
NCBI taxonomy Id: 288705
Other names: R. salmoninarum ATCC 33209, Renibacterium salmoninarum ATCC 33209, Renibacterium salmoninarum str. ATCC 33209, Renibacterium salmoninarum strain ATCC 33209
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.