Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABY21852.1 | ABY23544.1 | RSal33209_0096 | RSal33209_1811 | Proline iminopeptidase; Belongs to the peptidase S33 family. | Proline iminopeptidase. | 0.900 |
ABY21852.1 | ABY23551.1 | RSal33209_0096 | RSal33209_1818 | Proline iminopeptidase; Belongs to the peptidase S33 family. | Proline racemase; Belongs to the proline racemase family. | 0.900 |
ABY21852.1 | ABY23674.1 | RSal33209_0096 | RSal33209_1941 | Proline iminopeptidase; Belongs to the peptidase S33 family. | Proline dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.902 |
ABY21852.1 | proC | RSal33209_0096 | RSal33209_2727 | Proline iminopeptidase; Belongs to the peptidase S33 family. | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.903 |
ABY22376.1 | ABY23524.1 | RSal33209_0629 | RSal33209_1789 | Adenylosuccinate lyase. | 3-isopropylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily. | 0.600 |
ABY22376.1 | ilvC | RSal33209_0629 | RSal33209_1045 | Adenylosuccinate lyase. | Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate. | 0.504 |
ABY22376.1 | proC | RSal33209_0629 | RSal33209_2727 | Adenylosuccinate lyase. | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.746 |
ABY23524.1 | ABY22376.1 | RSal33209_1789 | RSal33209_0629 | 3-isopropylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily. | Adenylosuccinate lyase. | 0.600 |
ABY23524.1 | gpsA | RSal33209_1789 | RSal33209_1786 | 3-isopropylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily. | Glycerol-3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.642 |
ABY23524.1 | ilvC | RSal33209_1789 | RSal33209_1045 | 3-isopropylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily. | Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate. | 0.981 |
ABY23524.1 | proC | RSal33209_1789 | RSal33209_2727 | 3-isopropylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily. | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.840 |
ABY23544.1 | ABY21852.1 | RSal33209_1811 | RSal33209_0096 | Proline iminopeptidase. | Proline iminopeptidase; Belongs to the peptidase S33 family. | 0.900 |
ABY23544.1 | ABY23551.1 | RSal33209_1811 | RSal33209_1818 | Proline iminopeptidase. | Proline racemase; Belongs to the proline racemase family. | 0.936 |
ABY23544.1 | ABY23674.1 | RSal33209_1811 | RSal33209_1941 | Proline iminopeptidase. | Proline dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.902 |
ABY23544.1 | proC | RSal33209_1811 | RSal33209_2727 | Proline iminopeptidase. | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.903 |
ABY23551.1 | ABY21852.1 | RSal33209_1818 | RSal33209_0096 | Proline racemase; Belongs to the proline racemase family. | Proline iminopeptidase; Belongs to the peptidase S33 family. | 0.900 |
ABY23551.1 | ABY23544.1 | RSal33209_1818 | RSal33209_1811 | Proline racemase; Belongs to the proline racemase family. | Proline iminopeptidase. | 0.936 |
ABY23551.1 | ABY23674.1 | RSal33209_1818 | RSal33209_1941 | Proline racemase; Belongs to the proline racemase family. | Proline dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.927 |
ABY23551.1 | proC | RSal33209_1818 | RSal33209_2727 | Proline racemase; Belongs to the proline racemase family. | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.914 |
ABY23674.1 | ABY21852.1 | RSal33209_1941 | RSal33209_0096 | Proline dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Proline iminopeptidase; Belongs to the peptidase S33 family. | 0.902 |
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