STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABY24579.1Putative TetR-family transcriptional regulator. (171 aa)    
Predicted Functional Partners:
ABY24580.1
Multidrug resistance protein B; Partial, C-terminus.
 
     0.903
ABY24581.1
Multidrug resistance protein B; Partial, N-terminus.
 
     0.826
ABY23416.1
Nitrile hydratase subunit beta.
  
     0.660
ABY24582.1
Fe3+-siderophore transport system permease; Partial, N-terminus.
       0.508
ABY22533.1
Hypothetical protein.
  
     0.493
ABY24903.1
Transcriptional regulator, TetR family.
  
     0.479
ABY21862.1
Subtilisin-like protease.
  
     0.463
ABY24583.1
Fe3+-siderophore transport system permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
       0.455
ABY24584.1
Fe3+-siderophore transport system permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
       0.455
ABY24585.1
Fe3+-siderophore transport system permease; Partial, C-terminus; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
       0.439
Your Current Organism:
Renibacterium salmoninarum
NCBI taxonomy Id: 288705
Other names: R. salmoninarum ATCC 33209, Renibacterium salmoninarum ATCC 33209, Renibacterium salmoninarum str. ATCC 33209, Renibacterium salmoninarum strain ATCC 33209
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