STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABY24610.1Hypothetical signal transduction protein. (313 aa)    
Predicted Functional Partners:
ABY24615.1
Serine/threonine protein kinase.
 
 
 
 0.996
ABY24616.1
Serine/threonine protein kinase.
 
 
 
 0.994
ABY24611.1
Hypothetical exported protein with FHA domain.
 
   
 0.993
mviN
Virulence factor.
  
 
 
 0.993
ABY23128.1
2-oxoglutarate dehydrogenase E1 component.
    
 
 0.992
ABY24238.1
Serine/threonine protein kinase.
 
 
 
 0.985
ABY23533.1
Putative serine/threonine protein kinase.
 
 
 
 0.982
ABY24612.1
Protein phosphatase 2C.
 
 
 0.959
ABY24614.1
Penicillin-binding protein.
 
   
 0.933
ftsW.2
Cell division protein; Belongs to the SEDS family.
 
   
 0.919
Your Current Organism:
Renibacterium salmoninarum
NCBI taxonomy Id: 288705
Other names: R. salmoninarum ATCC 33209, Renibacterium salmoninarum ATCC 33209, Renibacterium salmoninarum str. ATCC 33209, Renibacterium salmoninarum strain ATCC 33209
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.