STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABY24631.1Glucan endo-1,3-beta-glucosidase; Partial, C-terminus. (281 aa)    
Predicted Functional Partners:
ABY24632.1
Glucan endo-1,3-beta-glucosidase; Partial, N-terminus.
     0.994
ABY22111.1
Endochitinase.
 
     0.639
ABY23785.1
Serine protease C precursor.
 
     0.583
ABY23927.1
Hypothetical protein.
 
     0.535
ABY24630.1
tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.
       0.488
ABY24633.1
Two-component response regulator; Partial, C-terminus.
       0.473
ABY24634.1
Two-component response regulator; Partial, N-terminus.
       0.451
ABY24635.1
Two component system histidine kinase.
       0.451
ABY24841.1
Transcriptional regulator, LacI family.
 
     0.438
ABY23787.1
Glucan endo-1,3-beta-glucosidase.
 
   
 0.435
Your Current Organism:
Renibacterium salmoninarum
NCBI taxonomy Id: 288705
Other names: R. salmoninarum ATCC 33209, Renibacterium salmoninarum ATCC 33209, Renibacterium salmoninarum str. ATCC 33209, Renibacterium salmoninarum strain ATCC 33209
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