STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABY24682.1Macrolide glycosyltransferase; Partial, N-terminus. (204 aa)    
Predicted Functional Partners:
ABY24681.1
Macrolide glycosyltransferase; Partial, C-terminus.
     0.994
ABY23798.1
Cytochrome P450 superfamily.
  
 
 0.652
ABY24998.1
Hypothetical protein; Has some similarity with cytochrome p450.
  
 
 0.652
ABY24857.1
Chitosanase; Aids in the defense against invading fungal pathogens by degrading their cell wall chitosan.
  
  
 0.526
ABY24683.1
Carnitine racemase-like protein.
  
    0.519
ABY24680.1
Transporter, MFS superfamily.
       0.460
ABY24265.1
Heterocyst glycolipid synthase.
  
  
 0.450
ABY23785.1
Serine protease C precursor.
  
    0.411
Your Current Organism:
Renibacterium salmoninarum
NCBI taxonomy Id: 288705
Other names: R. salmoninarum ATCC 33209, Renibacterium salmoninarum ATCC 33209, Renibacterium salmoninarum str. ATCC 33209, Renibacterium salmoninarum strain ATCC 33209
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.