STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABY24728.1Integral membrane protein, putative. (368 aa)    
Predicted Functional Partners:
ABY22222.1
Conserved hypothetical membrane protein.
  
     0.742
ABY25257.1
Hypothetical protein.
  
     0.718
ABY21772.1
Hypothetical protein.
  
     0.710
ABY21805.1
Two-component response regulator.
  
     0.669
ABY21983.1
Hypothetical protein.
  
     0.621
ABY24729.1
Integral membrane protein.
       0.617
ABY23206.1
Conserved hypothetical protein.
  
     0.608
ABY25198.1
Lipoate-protein ligase A.
  
     0.590
ABY22924.1
Predicted secreted protein.
  
     0.561
ABY25018.1
Hypothetical membrane spanning protein.
  
     0.559
Your Current Organism:
Renibacterium salmoninarum
NCBI taxonomy Id: 288705
Other names: R. salmoninarum ATCC 33209, Renibacterium salmoninarum ATCC 33209, Renibacterium salmoninarum str. ATCC 33209, Renibacterium salmoninarum strain ATCC 33209
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.