STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABY24799.1Transcriptional regulator, LacI family; Partial, N-terminus. (220 aa)    
Predicted Functional Partners:
ABY24798.1
Transcriptional regulator, LacI family; Partial, C-terminus.
     0.910
ABY22649.1
Transcriptional regulator, LacI family.
  
     0.775
ABY25246.1
Transcriptional regulator; Partial, N-terminus.
  
     0.775
ABY22233.1
Transcriptional regulator, LacI family.
  
     0.774
ABY24918.1
Transcriptional regulator, LacI family.
  
     0.774
ABY22345.1
Sugar operon repressor; Partial, N-terminus.
  
     0.767
ABY24899.1
Dihydroxyacetone kinase phosphotransfer protein.
   
 
 0.584
hpr
Phosphocarrier protein.
   
 
 0.582
pheT
phenylalanyl-tRNA synthetase beta chain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
    
   0.554
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
   0.554
Your Current Organism:
Renibacterium salmoninarum
NCBI taxonomy Id: 288705
Other names: R. salmoninarum ATCC 33209, Renibacterium salmoninarum ATCC 33209, Renibacterium salmoninarum str. ATCC 33209, Renibacterium salmoninarum strain ATCC 33209
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.