STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABY24831.1Spermidine synthase; Partial, N-terminus. (125 aa)    
Predicted Functional Partners:
ABY24830.1
Spermidine synthase; Partial, C-terminus.
     0.992
ABY24832.1
O-methyltransferase; Partial, C-terminus.
  
    0.802
ABY24833.1
O-methyltransferase; Partial, N-terminus.
  
    0.719
ABY24834.1
Hypothetical protein.
       0.710
ABY24829.1
D-beta-hydroxybutyrate dehydrogenase.
       0.610
ABY22270.1
Hypothetical membrane protein.
  
     0.600
ABY24429.1
Membrane protein.
  
    0.559
ABY22385.1
Hypothetical membrane protein.
  
     0.556
ABY24835.1
Transcriptional regulator, TetR family.
       0.495
ABY24836.1
Conserved hypothetical protein.
       0.480
Your Current Organism:
Renibacterium salmoninarum
NCBI taxonomy Id: 288705
Other names: R. salmoninarum ATCC 33209, Renibacterium salmoninarum ATCC 33209, Renibacterium salmoninarum str. ATCC 33209, Renibacterium salmoninarum strain ATCC 33209
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.