STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pxpALactam utilization protein LAMB; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. (528 aa)    
Predicted Functional Partners:
ABY24849.1
Allophanate hydrolase subunit 1.
  
 0.997
ABY24847.1
Allophanate hydrolase subunit 2; Partial, C-terminus.
 
  
 0.982
ABY24848.1
Allophanate hydrolase subunit 2; Partial, N-terminus.
 
  
 0.981
ABY23674.1
Proline dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
  0.960
ABY21790.1
Gamma-glutamyltranspeptidase; Partial, C-terminus.
     
  0.900
ABY23430.1
Carboxylate-amine ligase; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily.
     
  0.900
ABY25213.1
Gamma-glutamyltranspeptidase; Partial, C-terminus.
     
  0.900
ABY22350.1
Glutamine synthetase.
   
 
  0.805
ABY23359.1
NAD-specific glutamate dehydrogenase.
    
  0.805
ABY24173.1
Glutamine synthetase.
   
 
  0.805
Your Current Organism:
Renibacterium salmoninarum
NCBI taxonomy Id: 288705
Other names: R. salmoninarum ATCC 33209, Renibacterium salmoninarum ATCC 33209, Renibacterium salmoninarum str. ATCC 33209, Renibacterium salmoninarum strain ATCC 33209
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