STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABY24994.1Possible carbamoyl phosphate synthase- inactivated. (187 aa)    
Predicted Functional Partners:
ABY24993.1
Coenzyme F390 synthetase.
 
     0.947
ABY24995.1
Possible carbamoyl phosphate synthase- inactivated.
      0.933
ABY24996.1
Conserved hypothetical protein.
      0.912
ABY24998.1
Hypothetical protein; Has some similarity with cytochrome p450.
 
     0.831
ABY24997.1
3-oxoacyl-[acyl-carrier-protein] synthase III.
 
     0.745
ABY24992.1
Membrane alanine aminopeptidase.
       0.639
ABY24999.1
Probable dehydrogenase, putative.
 
     0.604
ABY24989.1
Ribose 5-phosphate isomerase.
  
    0.481
ABY24991.1
Putative dinucleotide-utilizing enzyme.
  
    0.473
ABY24990.1
Membrane protein, putative.
       0.468
Your Current Organism:
Renibacterium salmoninarum
NCBI taxonomy Id: 288705
Other names: R. salmoninarum ATCC 33209, Renibacterium salmoninarum ATCC 33209, Renibacterium salmoninarum str. ATCC 33209, Renibacterium salmoninarum strain ATCC 33209
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