Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABY22538.1 | ABY25042.1 | RSal33209_0791 | RSal33209_3331 | Transcriptional regulator, LuxR family; Partial, N-terminus. | SIR2 family protein. | 0.518 |
ABY22538.1 | phnB.1 | RSal33209_0791 | RSal33209_3358 | Transcriptional regulator, LuxR family; Partial, N-terminus. | PhnB; Partial, C-terminus. | 0.471 |
ABY22538.1 | phnB.2 | RSal33209_0791 | RSal33209_3359 | Transcriptional regulator, LuxR family; Partial, N-terminus. | PhnB; Partial, N-terminus. | 0.471 |
ABY25042.1 | ABY22538.1 | RSal33209_3331 | RSal33209_0791 | SIR2 family protein. | Transcriptional regulator, LuxR family; Partial, N-terminus. | 0.518 |
ABY25042.1 | phnB.1 | RSal33209_3331 | RSal33209_3358 | SIR2 family protein. | PhnB; Partial, C-terminus. | 0.480 |
ABY25042.1 | phnB.2 | RSal33209_3331 | RSal33209_3359 | SIR2 family protein. | PhnB; Partial, N-terminus. | 0.480 |
ABY25070.1 | phnB.1 | RSal33209_3360 | RSal33209_3358 | Aspartokinase; Belongs to the aspartokinase family. | PhnB; Partial, C-terminus. | 0.492 |
ABY25070.1 | phnB.2 | RSal33209_3360 | RSal33209_3359 | Aspartokinase; Belongs to the aspartokinase family. | PhnB; Partial, N-terminus. | 0.523 |
phnB.1 | ABY22538.1 | RSal33209_3358 | RSal33209_0791 | PhnB; Partial, C-terminus. | Transcriptional regulator, LuxR family; Partial, N-terminus. | 0.471 |
phnB.1 | ABY25042.1 | RSal33209_3358 | RSal33209_3331 | PhnB; Partial, C-terminus. | SIR2 family protein. | 0.480 |
phnB.1 | ABY25070.1 | RSal33209_3358 | RSal33209_3360 | PhnB; Partial, C-terminus. | Aspartokinase; Belongs to the aspartokinase family. | 0.492 |
phnB.1 | phnB.2 | RSal33209_3358 | RSal33209_3359 | PhnB; Partial, C-terminus. | PhnB; Partial, N-terminus. | 0.933 |
phnB.2 | ABY22538.1 | RSal33209_3359 | RSal33209_0791 | PhnB; Partial, N-terminus. | Transcriptional regulator, LuxR family; Partial, N-terminus. | 0.471 |
phnB.2 | ABY25042.1 | RSal33209_3359 | RSal33209_3331 | PhnB; Partial, N-terminus. | SIR2 family protein. | 0.480 |
phnB.2 | ABY25070.1 | RSal33209_3359 | RSal33209_3360 | PhnB; Partial, N-terminus. | Aspartokinase; Belongs to the aspartokinase family. | 0.523 |
phnB.2 | phnB.1 | RSal33209_3359 | RSal33209_3358 | PhnB; Partial, N-terminus. | PhnB; Partial, C-terminus. | 0.933 |