Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABY25107.1 | ABY25108.1 | RSal33209_3397 | RSal33209_3398 | OrfB; IS994. | OrfA; IS994. | 0.779 |
ABY25107.1 | ABY25109.1 | RSal33209_3397 | RSal33209_3399 | OrfB; IS994. | Putative two component system sensor kinase. | 0.463 |
ABY25107.1 | ABY25110.1 | RSal33209_3397 | RSal33209_3400 | OrfB; IS994. | Hypothetical protein. | 0.447 |
ABY25108.1 | ABY25107.1 | RSal33209_3398 | RSal33209_3397 | OrfA; IS994. | OrfB; IS994. | 0.779 |
ABY25108.1 | ABY25109.1 | RSal33209_3398 | RSal33209_3399 | OrfA; IS994. | Putative two component system sensor kinase. | 0.463 |
ABY25108.1 | ABY25110.1 | RSal33209_3398 | RSal33209_3400 | OrfA; IS994. | Hypothetical protein. | 0.447 |
ABY25109.1 | ABY25107.1 | RSal33209_3399 | RSal33209_3397 | Putative two component system sensor kinase. | OrfB; IS994. | 0.463 |
ABY25109.1 | ABY25108.1 | RSal33209_3399 | RSal33209_3398 | Putative two component system sensor kinase. | OrfA; IS994. | 0.463 |
ABY25109.1 | ABY25110.1 | RSal33209_3399 | RSal33209_3400 | Putative two component system sensor kinase. | Hypothetical protein. | 0.744 |
ABY25109.1 | ABY25111.1 | RSal33209_3399 | RSal33209_3401 | Putative two component system sensor kinase. | 23S rRNA methyltransferase. | 0.407 |
ABY25110.1 | ABY25107.1 | RSal33209_3400 | RSal33209_3397 | Hypothetical protein. | OrfB; IS994. | 0.447 |
ABY25110.1 | ABY25108.1 | RSal33209_3400 | RSal33209_3398 | Hypothetical protein. | OrfA; IS994. | 0.447 |
ABY25110.1 | ABY25109.1 | RSal33209_3400 | RSal33209_3399 | Hypothetical protein. | Putative two component system sensor kinase. | 0.744 |
ABY25110.1 | ABY25111.1 | RSal33209_3400 | RSal33209_3401 | Hypothetical protein. | 23S rRNA methyltransferase. | 0.421 |
ABY25111.1 | ABY25109.1 | RSal33209_3401 | RSal33209_3399 | 23S rRNA methyltransferase. | Putative two component system sensor kinase. | 0.407 |
ABY25111.1 | ABY25110.1 | RSal33209_3401 | RSal33209_3400 | 23S rRNA methyltransferase. | Hypothetical protein. | 0.421 |