Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABY24135.1 | ABY25176.1 | RSal33209_2409 | RSal33209_3467 | Thymidine kinase. | 16S rRNA m(2)G 966 methyltransferase; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA. | 0.448 |
ABY24429.1 | ABY25176.1 | RSal33209_2704 | RSal33209_3467 | Membrane protein. | 16S rRNA m(2)G 966 methyltransferase; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA. | 0.475 |
ABY24429.1 | rplA | RSal33209_2704 | RSal33209_0989 | Membrane protein. | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 0.743 |
ABY24429.1 | rpoB | RSal33209_2704 | RSal33209_2186 | Membrane protein. | DNA-directed RNA polymerase beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.935 |
ABY24429.1 | rpsG | RSal33209_2704 | RSal33209_2173 | Membrane protein. | SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.889 |
ABY25176.1 | ABY24135.1 | RSal33209_3467 | RSal33209_2409 | 16S rRNA m(2)G 966 methyltransferase; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA. | Thymidine kinase. | 0.448 |
ABY25176.1 | ABY24429.1 | RSal33209_3467 | RSal33209_2704 | 16S rRNA m(2)G 966 methyltransferase; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA. | Membrane protein. | 0.475 |
ABY25176.1 | ABY25177.1 | RSal33209_3467 | RSal33209_3468 | 16S rRNA m(2)G 966 methyltransferase; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA. | Hypothetical protein. | 0.540 |
ABY25176.1 | ABY25178.1 | RSal33209_3467 | RSal33209_3469 | 16S rRNA m(2)G 966 methyltransferase; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA. | Sensor transduction protein kinase. | 0.435 |
ABY25176.1 | ABY25179.1 | RSal33209_3467 | RSal33209_3470 | 16S rRNA m(2)G 966 methyltransferase; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA. | Two component response regulator. | 0.435 |
ABY25176.1 | nusA | RSal33209_3467 | RSal33209_0654 | 16S rRNA m(2)G 966 methyltransferase; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA. | Transcription elongation factor; Participates in both transcription termination and antitermination. | 0.475 |
ABY25176.1 | obg | RSal33209_3467 | RSal33209_3247 | 16S rRNA m(2)G 966 methyltransferase; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA. | GTP-binding protein OBG family; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | 0.521 |
ABY25176.1 | rplA | RSal33209_3467 | RSal33209_0989 | 16S rRNA m(2)G 966 methyltransferase; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA. | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 0.492 |
ABY25176.1 | rpoB | RSal33209_3467 | RSal33209_2186 | 16S rRNA m(2)G 966 methyltransferase; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA. | DNA-directed RNA polymerase beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.492 |
ABY25176.1 | rpsG | RSal33209_3467 | RSal33209_2173 | 16S rRNA m(2)G 966 methyltransferase; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA. | SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.478 |
ABY25177.1 | ABY25176.1 | RSal33209_3468 | RSal33209_3467 | Hypothetical protein. | 16S rRNA m(2)G 966 methyltransferase; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA. | 0.540 |
ABY25177.1 | ABY25178.1 | RSal33209_3468 | RSal33209_3469 | Hypothetical protein. | Sensor transduction protein kinase. | 0.611 |
ABY25177.1 | ABY25179.1 | RSal33209_3468 | RSal33209_3470 | Hypothetical protein. | Two component response regulator. | 0.608 |
ABY25178.1 | ABY25176.1 | RSal33209_3469 | RSal33209_3467 | Sensor transduction protein kinase. | 16S rRNA m(2)G 966 methyltransferase; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA. | 0.435 |
ABY25178.1 | ABY25177.1 | RSal33209_3469 | RSal33209_3468 | Sensor transduction protein kinase. | Hypothetical protein. | 0.611 |
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