Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SAI65393.1 | SAI69519.1 | SAMEA3906486_00133 | SAMEA3906486_02545 | ATP-dependent DNA-ligase. | ATP-dependent DNA-ligase. | 0.641 |
| SAI65393.1 | SAI69569.1 | SAMEA3906486_00133 | SAMEA3906486_02577 | ATP-dependent DNA-ligase. | Eukaryotic DNA topoisomerase I%2C catalytic core. | 0.841 |
| SAI65393.1 | SAI70303.1 | SAMEA3906486_00133 | SAMEA3906486_03015 | ATP-dependent DNA-ligase. | Predicted small integral membrane protein. | 0.575 |
| SAI65393.1 | SAI70869.1 | SAMEA3906486_00133 | SAMEA3906486_03214 | ATP-dependent DNA-ligase. | Protein of uncharacterised function DUF72. | 0.740 |
| SAI65393.1 | bfrF_1 | SAMEA3906486_00133 | SAMEA3906486_00131 | ATP-dependent DNA-ligase. | Ferric siderophore receptor. | 0.432 |
| SAI65393.1 | katA_1 | SAMEA3906486_00133 | SAMEA3906486_00649 | ATP-dependent DNA-ligase. | Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide. | 0.496 |
| SAI65393.1 | ku | SAMEA3906486_00133 | SAMEA3906486_00132 | ATP-dependent DNA-ligase. | Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. | 0.991 |
| SAI65393.1 | yciF | SAMEA3906486_00133 | SAMEA3906486_02585 | ATP-dependent DNA-ligase. | Domain of uncharacterised function (DUF892). | 0.684 |
| SAI65393.1 | ydaD | SAMEA3906486_00133 | SAMEA3906486_05595 | ATP-dependent DNA-ligase. | Short-chain dehydrogenase. | 0.472 |
| SAI69519.1 | SAI65393.1 | SAMEA3906486_02545 | SAMEA3906486_00133 | ATP-dependent DNA-ligase. | ATP-dependent DNA-ligase. | 0.641 |
| SAI69519.1 | SAI69569.1 | SAMEA3906486_02545 | SAMEA3906486_02577 | ATP-dependent DNA-ligase. | Eukaryotic DNA topoisomerase I%2C catalytic core. | 0.711 |
| SAI69519.1 | ku | SAMEA3906486_02545 | SAMEA3906486_00132 | ATP-dependent DNA-ligase. | Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. | 0.664 |
| SAI69569.1 | SAI65393.1 | SAMEA3906486_02577 | SAMEA3906486_00133 | Eukaryotic DNA topoisomerase I%2C catalytic core. | ATP-dependent DNA-ligase. | 0.841 |
| SAI69569.1 | SAI69519.1 | SAMEA3906486_02577 | SAMEA3906486_02545 | Eukaryotic DNA topoisomerase I%2C catalytic core. | ATP-dependent DNA-ligase. | 0.711 |
| SAI69569.1 | SAI70869.1 | SAMEA3906486_02577 | SAMEA3906486_03214 | Eukaryotic DNA topoisomerase I%2C catalytic core. | Protein of uncharacterised function DUF72. | 0.506 |
| SAI69569.1 | ku | SAMEA3906486_02577 | SAMEA3906486_00132 | Eukaryotic DNA topoisomerase I%2C catalytic core. | Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. | 0.706 |
| SAI69569.1 | yciF | SAMEA3906486_02577 | SAMEA3906486_02585 | Eukaryotic DNA topoisomerase I%2C catalytic core. | Domain of uncharacterised function (DUF892). | 0.475 |
| SAI69569.1 | ydaD | SAMEA3906486_02577 | SAMEA3906486_05595 | Eukaryotic DNA topoisomerase I%2C catalytic core. | Short-chain dehydrogenase. | 0.589 |
| SAI70303.1 | SAI65393.1 | SAMEA3906486_03015 | SAMEA3906486_00133 | Predicted small integral membrane protein. | ATP-dependent DNA-ligase. | 0.575 |
| SAI70303.1 | ku | SAMEA3906486_03015 | SAMEA3906486_00132 | Predicted small integral membrane protein. | Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. | 0.444 |
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