Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SAI69413.1 | SAI69591.1 | SAMEA3906486_02479 | SAMEA3906486_02590 | Two-component hyrid sensor and regulator. | Two-component hyrid sensor and regulator. | 0.999 |
SAI69413.1 | arcB | SAMEA3906486_02479 | SAMEA3906486_02480 | Two-component hyrid sensor and regulator. | Two-component hybrid sensor and regulator; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.999 |
SAI69413.1 | bvgS_1 | SAMEA3906486_02479 | SAMEA3906486_00421 | Two-component hyrid sensor and regulator. | Virulence sensor protein. | 0.999 |
SAI69413.1 | bvgS_2 | SAMEA3906486_02479 | SAMEA3906486_01512 | Two-component hyrid sensor and regulator. | Virulence sensor protein. | 0.999 |
SAI69413.1 | bvgS_3 | SAMEA3906486_02479 | SAMEA3906486_02454 | Two-component hyrid sensor and regulator. | Virulence sensor protein. | 0.999 |
SAI69413.1 | bvgS_4 | SAMEA3906486_02479 | SAMEA3906486_02896 | Two-component hyrid sensor and regulator. | Virulence sensor protein. | 0.999 |
SAI69413.1 | degS | SAMEA3906486_02479 | SAMEA3906486_00266 | Two-component hyrid sensor and regulator. | Two-component system sensor kinase. | 0.999 |
SAI69413.1 | kdpD_3 | SAMEA3906486_02479 | SAMEA3906486_03213 | Two-component hyrid sensor and regulator. | Two component sensor kinase. | 0.999 |
SAI69413.1 | rcsC_1 | SAMEA3906486_02479 | SAMEA3906486_03211 | Two-component hyrid sensor and regulator. | Two component sensor kinase for capsular biosynthesis. | 0.999 |
SAI69413.1 | uvrY | SAMEA3906486_02479 | SAMEA3906486_00267 | Two-component hyrid sensor and regulator. | Two-component system response regulator. | 0.987 |
SAI69591.1 | SAI69413.1 | SAMEA3906486_02590 | SAMEA3906486_02479 | Two-component hyrid sensor and regulator. | Two-component hyrid sensor and regulator. | 0.999 |
SAI69591.1 | arcB | SAMEA3906486_02590 | SAMEA3906486_02480 | Two-component hyrid sensor and regulator. | Two-component hybrid sensor and regulator; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.999 |
SAI69591.1 | bvgS_1 | SAMEA3906486_02590 | SAMEA3906486_00421 | Two-component hyrid sensor and regulator. | Virulence sensor protein. | 0.999 |
SAI69591.1 | bvgS_2 | SAMEA3906486_02590 | SAMEA3906486_01512 | Two-component hyrid sensor and regulator. | Virulence sensor protein. | 0.999 |
SAI69591.1 | bvgS_3 | SAMEA3906486_02590 | SAMEA3906486_02454 | Two-component hyrid sensor and regulator. | Virulence sensor protein. | 0.998 |
SAI69591.1 | bvgS_4 | SAMEA3906486_02590 | SAMEA3906486_02896 | Two-component hyrid sensor and regulator. | Virulence sensor protein. | 0.999 |
SAI69591.1 | degS | SAMEA3906486_02590 | SAMEA3906486_00266 | Two-component hyrid sensor and regulator. | Two-component system sensor kinase. | 0.999 |
SAI69591.1 | kdpD_3 | SAMEA3906486_02590 | SAMEA3906486_03213 | Two-component hyrid sensor and regulator. | Two component sensor kinase. | 0.998 |
SAI69591.1 | rcsC_1 | SAMEA3906486_02590 | SAMEA3906486_03211 | Two-component hyrid sensor and regulator. | Two component sensor kinase for capsular biosynthesis. | 0.999 |
SAI69591.1 | uvrY | SAMEA3906486_02590 | SAMEA3906486_00267 | Two-component hyrid sensor and regulator. | Two-component system response regulator. | 0.912 |
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