STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAI65537.1Lipid A core-O-antigen ligase and related enzymes. (440 aa)    
Predicted Functional Partners:
wcaJ_1
Capsular polysaccharide biosynthesis glucosyltransferase.
  
  
 0.931
wcaJ_2
Capsular polysaccharide biosynthesis glucosyltransferase.
  
  
 0.887
tagE_1
Glycosyltransferase.
  
 
 0.829
rfaC
Lipopolysaccharide heptosyltransferase-1.
  
 
 0.805
waaF
Heptosyltransferase II.
  
 
 0.805
wlbE
Glycosyl transferase family protein.
  
 
 0.799
SAI65539.1
Polysaccharide biosynthesis protein.
  
  
 0.798
SAI65535.1
Transferase.
  
  
 0.787
spsA
Glycosyl transferase.
  
  
 0.776
lacA
Galactoside O-acetyltransferase.
       0.742
Your Current Organism:
Bordetella ansorpii
NCBI taxonomy Id: 288768
Other names: B. ansorpii, strain SMC-8986
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.