Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SAI65325.1 | SAI65603.1 | SAMEA3906486_00064 | SAMEA3906486_00347 | VRR-NUC domain; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. | Phospholipase C. | 0.866 |
SAI65325.1 | cyaA | SAMEA3906486_00064 | SAMEA3906486_01868 | VRR-NUC domain; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. | Bifunctional hemolysin-adenylate cyclase. | 0.829 |
SAI65496.1 | SAI65603.1 | SAMEA3906486_00239 | SAMEA3906486_00347 | Subtilisin-like protease. | Phospholipase C. | 0.866 |
SAI65496.1 | cyaA | SAMEA3906486_00239 | SAMEA3906486_01868 | Subtilisin-like protease. | Bifunctional hemolysin-adenylate cyclase. | 0.836 |
SAI65603.1 | SAI65325.1 | SAMEA3906486_00347 | SAMEA3906486_00064 | Phospholipase C. | VRR-NUC domain; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. | 0.866 |
SAI65603.1 | SAI65496.1 | SAMEA3906486_00347 | SAMEA3906486_00239 | Phospholipase C. | Subtilisin-like protease. | 0.866 |
SAI65603.1 | SAI67505.1 | SAMEA3906486_00347 | SAMEA3906486_01553 | Phospholipase C. | Serine protease. | 0.866 |
SAI65603.1 | SAI70007.1 | SAMEA3906486_00347 | SAMEA3906486_02841 | Phospholipase C. | Type III secretion apparatus protein%2C YscD/HrpQ family. | 0.841 |
SAI65603.1 | SAI72380.1 | SAMEA3906486_00347 | SAMEA3906486_04101 | Phospholipase C. | Sulfate permease. | 0.898 |
SAI65603.1 | bscD | SAMEA3906486_00347 | SAMEA3906486_02842 | Phospholipase C. | Type III secretion protein. | 0.841 |
SAI65603.1 | cyaA | SAMEA3906486_00347 | SAMEA3906486_01868 | Phospholipase C. | Bifunctional hemolysin-adenylate cyclase. | 0.968 |
SAI65603.1 | nuoM | SAMEA3906486_00347 | SAMEA3906486_04819 | Phospholipase C. | NADH dehydrogenase subunit M. | 0.985 |
SAI65603.1 | ptlH_1 | SAMEA3906486_00347 | SAMEA3906486_03848 | Phospholipase C. | General secretion pathway ATPase. | 0.854 |
SAI65603.1 | ychM | SAMEA3906486_00347 | SAMEA3906486_04853 | Phospholipase C. | Sulfate transporter. | 0.898 |
SAI67505.1 | SAI65603.1 | SAMEA3906486_01553 | SAMEA3906486_00347 | Serine protease. | Phospholipase C. | 0.866 |
SAI67505.1 | cyaA | SAMEA3906486_01553 | SAMEA3906486_01868 | Serine protease. | Bifunctional hemolysin-adenylate cyclase. | 0.806 |
SAI70007.1 | SAI65603.1 | SAMEA3906486_02841 | SAMEA3906486_00347 | Type III secretion apparatus protein%2C YscD/HrpQ family. | Phospholipase C. | 0.841 |
SAI70007.1 | bscD | SAMEA3906486_02841 | SAMEA3906486_02842 | Type III secretion apparatus protein%2C YscD/HrpQ family. | Type III secretion protein. | 0.773 |
SAI70007.1 | cyaA | SAMEA3906486_02841 | SAMEA3906486_01868 | Type III secretion apparatus protein%2C YscD/HrpQ family. | Bifunctional hemolysin-adenylate cyclase. | 0.652 |
SAI72380.1 | SAI65603.1 | SAMEA3906486_04101 | SAMEA3906486_00347 | Sulfate permease. | Phospholipase C. | 0.898 |
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