STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fecR2_2Transmembrane sensor. (335 aa)    
Predicted Functional Partners:
fecI_1
ECF family sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
 
 0.931
SAI65716.1
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid.
 
 
  0.892
bupI_1
ECF sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
 
  0.872
hurI_1
Heme uptake RNA polymerase sigma-70 factor; Belongs to the sigma-70 factor family. ECF subfamily.
 
 0.828
fecI_3
ECF family sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
 
 0.828
hurI_3
Heme uptake RNA polymerase sigma-70 factor; Belongs to the sigma-70 factor family. ECF subfamily.
 
 0.828
fecI_2
ECF family sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
 
 0.827
SAI69126.1
ECF family sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
 
 0.827
SAI74666.1
ECF family sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
 
 0.827
bupI_5
ECF sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
 
 0.827
Your Current Organism:
Bordetella ansorpii
NCBI taxonomy Id: 288768
Other names: B. ansorpii, strain SMC-8986
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.