Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SAI69719.1 | cotSA_1 | SAMEA3906486_02667 | SAMEA3906486_00893 | Membrane protein. | Glycosyl transferase. | 0.400 |
SAI69719.1 | cotSA_2 | SAMEA3906486_02667 | SAMEA3906486_04530 | Membrane protein. | Glycosyltransferase. | 0.499 |
SAI69719.1 | kfoC_1 | SAMEA3906486_02667 | SAMEA3906486_00494 | Membrane protein. | Glycosyl transferase family protein. | 0.630 |
SAI69719.1 | rssA_2 | SAMEA3906486_02667 | SAMEA3906486_02692 | Membrane protein. | Two-component system sensor protein. | 0.711 |
SAI69719.1 | tagE_3 | SAMEA3906486_02667 | SAMEA3906486_02702 | Membrane protein. | Glycosyltransferase. | 0.484 |
cotSA_1 | SAI69719.1 | SAMEA3906486_00893 | SAMEA3906486_02667 | Glycosyl transferase. | Membrane protein. | 0.400 |
cotSA_1 | cotSA_2 | SAMEA3906486_00893 | SAMEA3906486_04530 | Glycosyl transferase. | Glycosyltransferase. | 0.759 |
cotSA_1 | kfoC_1 | SAMEA3906486_00893 | SAMEA3906486_00494 | Glycosyl transferase. | Glycosyl transferase family protein. | 0.650 |
cotSA_1 | wbpP_2 | SAMEA3906486_00893 | SAMEA3906486_02705 | Glycosyl transferase. | NDP-sugar epimerase. | 0.600 |
cotSA_1 | wcaJ_1 | SAMEA3906486_00893 | SAMEA3906486_00287 | Glycosyl transferase. | Capsular polysaccharide biosynthesis glucosyltransferase. | 0.688 |
cotSA_1 | wcaJ_2 | SAMEA3906486_00893 | SAMEA3906486_01149 | Glycosyl transferase. | Capsular polysaccharide biosynthesis glucosyltransferase. | 0.691 |
cotSA_2 | SAI69719.1 | SAMEA3906486_04530 | SAMEA3906486_02667 | Glycosyltransferase. | Membrane protein. | 0.499 |
cotSA_2 | cotSA_1 | SAMEA3906486_04530 | SAMEA3906486_00893 | Glycosyltransferase. | Glycosyl transferase. | 0.759 |
cotSA_2 | kfoC_1 | SAMEA3906486_04530 | SAMEA3906486_00494 | Glycosyltransferase. | Glycosyl transferase family protein. | 0.527 |
cotSA_2 | tagE_2 | SAMEA3906486_04530 | SAMEA3906486_02700 | Glycosyltransferase. | Glycosyltransferase. | 0.744 |
cotSA_2 | tagE_3 | SAMEA3906486_04530 | SAMEA3906486_02702 | Glycosyltransferase. | Glycosyltransferase. | 0.720 |
cotSA_2 | wbpP_2 | SAMEA3906486_04530 | SAMEA3906486_02705 | Glycosyltransferase. | NDP-sugar epimerase. | 0.546 |
cotSA_2 | wcaJ_1 | SAMEA3906486_04530 | SAMEA3906486_00287 | Glycosyltransferase. | Capsular polysaccharide biosynthesis glucosyltransferase. | 0.694 |
cotSA_2 | wcaJ_2 | SAMEA3906486_04530 | SAMEA3906486_01149 | Glycosyltransferase. | Capsular polysaccharide biosynthesis glucosyltransferase. | 0.696 |
dmlR_2 | kfoC_1 | SAMEA3906486_00495 | SAMEA3906486_00494 | LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | Glycosyl transferase family protein. | 0.543 |
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