node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SAI72936.1 | dnaA | SAMEA3906486_04362 | SAMEA3906486_01080 | Uncharacterised protein. | Chromosomal replication initiation protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | 0.824 |
SAI72936.1 | hda_1 | SAMEA3906486_04362 | SAMEA3906486_00570 | Uncharacterised protein. | DnaA regulatory inactivator Hda; Belongs to the DnaA family. | 0.824 |
aspB | dltA_3 | SAMEA3906486_00920 | SAMEA3906486_05219 | Glutamate synthase [NADPH] large chain. | D-alanine-D-alanyl carrier protein ligase. | 0.855 |
aspB | dnaA | SAMEA3906486_00920 | SAMEA3906486_01080 | Glutamate synthase [NADPH] large chain. | Chromosomal replication initiation protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | 0.743 |
aspB | dnaN | SAMEA3906486_00920 | SAMEA3906486_01079 | Glutamate synthase [NADPH] large chain. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.511 |
aspB | hda_1 | SAMEA3906486_00920 | SAMEA3906486_00570 | Glutamate synthase [NADPH] large chain. | DnaA regulatory inactivator Hda; Belongs to the DnaA family. | 0.743 |
aspB | pcnB | SAMEA3906486_00920 | SAMEA3906486_00572 | Glutamate synthase [NADPH] large chain. | poly(A) polymerase; Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control. Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | 0.431 |
dltA_3 | aspB | SAMEA3906486_05219 | SAMEA3906486_00920 | D-alanine-D-alanyl carrier protein ligase. | Glutamate synthase [NADPH] large chain. | 0.855 |
dltA_3 | dnaA | SAMEA3906486_05219 | SAMEA3906486_01080 | D-alanine-D-alanyl carrier protein ligase. | Chromosomal replication initiation protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | 0.723 |
dltA_3 | dnaN | SAMEA3906486_05219 | SAMEA3906486_01079 | D-alanine-D-alanyl carrier protein ligase. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.577 |
dltA_3 | hda_1 | SAMEA3906486_05219 | SAMEA3906486_00570 | D-alanine-D-alanyl carrier protein ligase. | DnaA regulatory inactivator Hda; Belongs to the DnaA family. | 0.754 |
dltA_3 | rpmE2 | SAMEA3906486_05219 | SAMEA3906486_04009 | D-alanine-D-alanyl carrier protein ligase. | 50S ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family. | 0.569 |
dnaA | SAI72936.1 | SAMEA3906486_01080 | SAMEA3906486_04362 | Chromosomal replication initiation protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | Uncharacterised protein. | 0.824 |
dnaA | aspB | SAMEA3906486_01080 | SAMEA3906486_00920 | Chromosomal replication initiation protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | Glutamate synthase [NADPH] large chain. | 0.743 |
dnaA | dltA_3 | SAMEA3906486_01080 | SAMEA3906486_05219 | Chromosomal replication initiation protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | D-alanine-D-alanyl carrier protein ligase. | 0.723 |
dnaA | dnaB | SAMEA3906486_01080 | SAMEA3906486_05044 | Chromosomal replication initiation protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. | 0.980 |
dnaA | dnaN | SAMEA3906486_01080 | SAMEA3906486_01079 | Chromosomal replication initiation protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.999 |
dnaA | hda_1 | SAMEA3906486_01080 | SAMEA3906486_00570 | Chromosomal replication initiation protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | DnaA regulatory inactivator Hda; Belongs to the DnaA family. | 0.849 |
dnaA | rpmE2 | SAMEA3906486_01080 | SAMEA3906486_04009 | Chromosomal replication initiation protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | 50S ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family. | 0.415 |
dnaB | dnaA | SAMEA3906486_05044 | SAMEA3906486_01080 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. | Chromosomal replication initiation protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | 0.980 |