STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAI66490.1Membrane protein. (874 aa)    
Predicted Functional Partners:
SAI65539.1
Polysaccharide biosynthesis protein.
  
     0.772
SAI65548.1
Lipoprotein.
  
     0.762
bopN
Outer protein N.
  
     0.756
SAI71062.1
Protein of uncharacterised function (DUF3604).
  
     0.753
bscQ
Type III secretion protein.
  
     0.741
SAI71956.1
Pilus assembly protein.
  
     0.726
SAI69949.1
Inner membrane transport protein.
  
     0.724
ywaD
Arginyl aminopeptidase.
  
     0.724
SAI71386.1
Lipoprotein.
  
     0.721
SAI65436.1
Fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain.
  
     0.712
Your Current Organism:
Bordetella ansorpii
NCBI taxonomy Id: 288768
Other names: B. ansorpii, strain SMC-8986
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.