STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbsAABC transporter ATP-binding protein. (515 aa)    
Predicted Functional Partners:
SAI66588.1
ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.998
SAI66590.1
ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
 0.998
SAI66584.1
ABC transporter substrate-binding protein.
 
 
 0.996
codA
Cytosine deaminase.
 
  
  0.833
ycjP
Binding-protein-dependent transport system inner membrane protein.
  
 
  0.685
ugpA_1
Binding-protein-dependent transport system inner membrane protein.
  
 
  0.665
ugpE
Sn-glycerol-3-phosphate ABC transporter permease; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
   
 
  0.637
ugpC_2
Glycerol-3-phosphate transporter ATP-binding subunit; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.
  
  
 
0.626
ugpC_1
Sugar ABC transporter%2C ATP-binding protein; Belongs to the ABC transporter superfamily.
  
  
 
0.625
ugpA_2
Sn-glycerol-3-phosphate ABC transporter permease.
   
 
  0.609
Your Current Organism:
Bordetella ansorpii
NCBI taxonomy Id: 288768
Other names: B. ansorpii, strain SMC-8986
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