STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAI66621.1Extracellular substrate-binding protein. (343 aa)    
Predicted Functional Partners:
ydcV_2
Binding-protein-dependent transport system membrane protein.
 
 
 0.946
potB_2
Binding-protein-dependent transport system inner membrane protein.
 
 
 0.941
modB_1
Binding-protein-dependent transport system membrane protein.
 
 
 0.909
potA_4
ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.904
potB_1
Binding-protein-dependent transport system inner membrane protein.
 
 
 0.886
ydcV_4
Binding-protein-dependent transport system membrane protein.
 
 
 0.821
soxA_1
Oxidoreductase.
 
     0.816
potB_3
Binding-protein-dependent transport system inner membrane protein.
 
 
 0.813
potA_1
ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.804
SAI66608.1
Pyridine nucleotide-disulfide oxidoreductase.
 
     0.759
Your Current Organism:
Bordetella ansorpii
NCBI taxonomy Id: 288768
Other names: B. ansorpii, strain SMC-8986
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