STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAI67298.1Acyl-protein synthetase. (362 aa)    
Predicted Functional Partners:
SAI67296.1
acyl-CoA reductase.
 
 
 0.996
paaE
Phenylacetic acid degradation NADH oxidoreductase.
 
  
 0.756
thcB
Oxidoreductase; Belongs to the cytochrome P450 family.
    
 0.735
fhp_1
Nitric oxide dioxygenase.
    
 0.715
SAI67291.1
ABC transporter substrate binding protein.
 
    0.712
ssuC_4
ABC transporter permease.
       0.683
ptk
Capsular polysaccharide biosynthesis protein.
    
  0.676
SAI73869.1
Capsular polysaccharide biosynthesis protein.
    
  0.676
ssuB_2
ABC transporter ATP-binding protein.
       0.651
wcaJ_1
Capsular polysaccharide biosynthesis glucosyltransferase.
    
  0.638
Your Current Organism:
Bordetella ansorpii
NCBI taxonomy Id: 288768
Other names: B. ansorpii, strain SMC-8986
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