Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SAI69413.1 | SAI69883.1 | SAMEA3906486_02479 | SAMEA3906486_02767 | Two-component hyrid sensor and regulator. | Lipoprotein. | 0.963 |
SAI69413.1 | SAI71635.1 | SAMEA3906486_02479 | SAMEA3906486_03657 | Two-component hyrid sensor and regulator. | Two-component hyrid sensor and regulator. | 0.999 |
SAI69413.1 | aspB | SAMEA3906486_02479 | SAMEA3906486_00920 | Two-component hyrid sensor and regulator. | Glutamate synthase [NADPH] large chain. | 0.512 |
SAI69413.1 | bvgS_1 | SAMEA3906486_02479 | SAMEA3906486_00421 | Two-component hyrid sensor and regulator. | Virulence sensor protein. | 0.999 |
SAI69413.1 | rcsC_1 | SAMEA3906486_02479 | SAMEA3906486_03211 | Two-component hyrid sensor and regulator. | Two component sensor kinase for capsular biosynthesis. | 0.999 |
SAI69413.1 | rpoB | SAMEA3906486_02479 | SAMEA3906486_01184 | Two-component hyrid sensor and regulator. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.407 |
SAI69413.1 | rpoZ | SAMEA3906486_02479 | SAMEA3906486_05480 | Two-component hyrid sensor and regulator. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.490 |
SAI69413.1 | vfr_1 | SAMEA3906486_02479 | SAMEA3906486_01443 | Two-component hyrid sensor and regulator. | Cyclic nucleotide-binding protein. | 0.838 |
SAI69883.1 | SAI69413.1 | SAMEA3906486_02767 | SAMEA3906486_02479 | Lipoprotein. | Two-component hyrid sensor and regulator. | 0.963 |
SAI69883.1 | SAI71635.1 | SAMEA3906486_02767 | SAMEA3906486_03657 | Lipoprotein. | Two-component hyrid sensor and regulator. | 0.963 |
SAI69883.1 | bvgS_1 | SAMEA3906486_02767 | SAMEA3906486_00421 | Lipoprotein. | Virulence sensor protein. | 0.940 |
SAI69883.1 | rcsC_1 | SAMEA3906486_02767 | SAMEA3906486_03211 | Lipoprotein. | Two component sensor kinase for capsular biosynthesis. | 0.976 |
SAI69883.1 | vfr_1 | SAMEA3906486_02767 | SAMEA3906486_01443 | Lipoprotein. | Cyclic nucleotide-binding protein. | 0.876 |
SAI71635.1 | SAI69413.1 | SAMEA3906486_03657 | SAMEA3906486_02479 | Two-component hyrid sensor and regulator. | Two-component hyrid sensor and regulator. | 0.999 |
SAI71635.1 | SAI69883.1 | SAMEA3906486_03657 | SAMEA3906486_02767 | Two-component hyrid sensor and regulator. | Lipoprotein. | 0.963 |
SAI71635.1 | aspB | SAMEA3906486_03657 | SAMEA3906486_00920 | Two-component hyrid sensor and regulator. | Glutamate synthase [NADPH] large chain. | 0.512 |
SAI71635.1 | bvgS_1 | SAMEA3906486_03657 | SAMEA3906486_00421 | Two-component hyrid sensor and regulator. | Virulence sensor protein. | 0.999 |
SAI71635.1 | rcsC_1 | SAMEA3906486_03657 | SAMEA3906486_03211 | Two-component hyrid sensor and regulator. | Two component sensor kinase for capsular biosynthesis. | 0.999 |
SAI71635.1 | rpoB | SAMEA3906486_03657 | SAMEA3906486_01184 | Two-component hyrid sensor and regulator. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.407 |
SAI71635.1 | rpoZ | SAMEA3906486_03657 | SAMEA3906486_05480 | Two-component hyrid sensor and regulator. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.560 |
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