Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SAI67349.1 | SAI67353.1 | SAMEA3906486_01463 | SAMEA3906486_01465 | Uncharacterized conserved protein. | DNA-binding protein. | 0.801 |
SAI67349.1 | rimO | SAMEA3906486_01463 | SAMEA3906486_01464 | Uncharacterized conserved protein. | Ribosomal protein S12 methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily. | 0.781 |
SAI67353.1 | SAI67349.1 | SAMEA3906486_01465 | SAMEA3906486_01463 | DNA-binding protein. | Uncharacterized conserved protein. | 0.801 |
SAI67353.1 | SAI74464.1 | SAMEA3906486_01465 | SAMEA3906486_05178 | DNA-binding protein. | Uncharacterised protein. | 0.976 |
SAI67353.1 | SAI74875.1 | SAMEA3906486_01465 | SAMEA3906486_05593 | DNA-binding protein. | Bacterial protein of uncharacterised function (DUF883). | 0.504 |
SAI67353.1 | dps | SAMEA3906486_01465 | SAMEA3906486_05536 | DNA-binding protein. | Ferritin-like DNA-binding protein; Belongs to the Dps family. | 0.521 |
SAI67353.1 | elaB | SAMEA3906486_01465 | SAMEA3906486_00438 | DNA-binding protein. | Membrane protein. | 0.504 |
SAI67353.1 | fitB | SAMEA3906486_01465 | SAMEA3906486_03613 | DNA-binding protein. | Probable ribonuclease FitB; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | 0.554 |
SAI67353.1 | rimO | SAMEA3906486_01465 | SAMEA3906486_01464 | DNA-binding protein. | Ribosomal protein S12 methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily. | 0.775 |
SAI67353.1 | ycaC_2 | SAMEA3906486_01465 | SAMEA3906486_03872 | DNA-binding protein. | Hydrolase. | 0.515 |
SAI67353.1 | ycaC_3 | SAMEA3906486_01465 | SAMEA3906486_04951 | DNA-binding protein. | Hydrolase. | 0.515 |
SAI67353.1 | yddM | SAMEA3906486_01465 | SAMEA3906486_04060 | DNA-binding protein. | Uncharacterized HTH-type transcriptional regulator YddM. | 0.518 |
SAI74464.1 | SAI67353.1 | SAMEA3906486_05178 | SAMEA3906486_01465 | Uncharacterised protein. | DNA-binding protein. | 0.976 |
SAI74464.1 | fitB | SAMEA3906486_05178 | SAMEA3906486_03613 | Uncharacterised protein. | Probable ribonuclease FitB; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | 0.578 |
SAI74464.1 | yddM | SAMEA3906486_05178 | SAMEA3906486_04060 | Uncharacterised protein. | Uncharacterized HTH-type transcriptional regulator YddM. | 0.416 |
SAI74875.1 | SAI67353.1 | SAMEA3906486_05593 | SAMEA3906486_01465 | Bacterial protein of uncharacterised function (DUF883). | DNA-binding protein. | 0.504 |
SAI74875.1 | dps | SAMEA3906486_05593 | SAMEA3906486_05536 | Bacterial protein of uncharacterised function (DUF883). | Ferritin-like DNA-binding protein; Belongs to the Dps family. | 0.741 |
dps | SAI67353.1 | SAMEA3906486_05536 | SAMEA3906486_01465 | Ferritin-like DNA-binding protein; Belongs to the Dps family. | DNA-binding protein. | 0.521 |
dps | SAI74875.1 | SAMEA3906486_05536 | SAMEA3906486_05593 | Ferritin-like DNA-binding protein; Belongs to the Dps family. | Bacterial protein of uncharacterised function (DUF883). | 0.741 |
dps | elaB | SAMEA3906486_05536 | SAMEA3906486_00438 | Ferritin-like DNA-binding protein; Belongs to the Dps family. | Membrane protein. | 0.741 |
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