STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
catC2Methylmuconolactone isomerase; Belongs to the muconolactone Delta-isomerase family. (91 aa)    
Predicted Functional Partners:
catB3
Chloromuconate cycloisomerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
 
 0.994
catD2_1
3-oxoadipate enol-lactone hydrolase.
 
 
 0.987
SAI67624.1
YciI-like protein.
 
    0.916
catJ
3-oxoadipate CoA-transferase subunit B.
 
    0.823
SAI70943.1
Carboxymuconolactone decarboxylase.
    
 0.811
ascD_1
CDP-6-deoxy-delta-3%2C4-glucoseen reductase.
 
  
 0.721
pcaI4
3-oxoadipate CoA-transferase subunit A.
 
  
 0.710
ndoR
CDP-6-deoxy-delta-3%2C4-glucoseen reductase.
  
  
 0.680
ascD_2
CDP-6-deoxy-delta-3%2C4-glucoseen reductase.
  
  
 0.680
bpoA2
3-oxoadipate enol-lactone hydrolase.
  
 
 0.590
Your Current Organism:
Bordetella ansorpii
NCBI taxonomy Id: 288768
Other names: B. ansorpii, strain SMC-8986
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