STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cyoB1Cytochrome O ubiquinol oxidase subunit I; Belongs to the heme-copper respiratory oxidase family. (660 aa)    
Predicted Functional Partners:
cyoA
Ubiquinol oxidase polypeptide II.
 
 0.999
cyoC1
Cytochrome o ubiquinol oxidase subunit III.
 0.999
cyoD1
Cytochrome 0 ubiquinol oxidase.
 
 0.999
cyoD
Cytochrome ubiquinol oxidase subunit IV.
 
 0.997
cyoC2
Cytochrome o ubiquinol oxidase subunit III.
 0.996
cyoA2
Cytochrome o ubiquinol oxidase subunit II.
 
 0.996
petB
Cytochrome B; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
 0.995
nuoM
NADH dehydrogenase subunit M.
  
 0.995
nuoH
NADH dehydrogenase subunit H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.
  
 0.994
coxC
Cytochrome c oxidase subunit III.
 0.993
Your Current Organism:
Bordetella ansorpii
NCBI taxonomy Id: 288768
Other names: B. ansorpii, strain SMC-8986
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