Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SAI66044.1 | cysA_2 | SAMEA3906486_00742 | SAMEA3906486_01833 | PUA domain (predicted RNA-binding domain). | Sulfate transport ATP-binding protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. | 0.677 |
SAI66044.1 | cysI | SAMEA3906486_00742 | SAMEA3906486_01614 | PUA domain (predicted RNA-binding domain). | Sulfite reductase. | 0.926 |
SAI66044.1 | cysN | SAMEA3906486_00742 | SAMEA3906486_01830 | PUA domain (predicted RNA-binding domain). | Sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.993 |
SAI66044.1 | cysT | SAMEA3906486_00742 | SAMEA3906486_01835 | PUA domain (predicted RNA-binding domain). | Sulfate transport system permease; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.728 |
SAI66044.1 | cysW_1 | SAMEA3906486_00742 | SAMEA3906486_01834 | PUA domain (predicted RNA-binding domain). | Sulfate transport system permease. | 0.794 |
SAI66044.1 | modB_2 | SAMEA3906486_00742 | SAMEA3906486_01031 | PUA domain (predicted RNA-binding domain). | Binding-protein-dependent transport system%2C permease. | 0.728 |
SAI66044.1 | modC | SAMEA3906486_00742 | SAMEA3906486_01912 | PUA domain (predicted RNA-binding domain). | Molybdenum ABC transporter ATP-binding protein. | 0.677 |
SAI66044.1 | sbp | SAMEA3906486_00742 | SAMEA3906486_01836 | PUA domain (predicted RNA-binding domain). | Sulfate-binding protein. | 0.794 |
cysA_2 | SAI66044.1 | SAMEA3906486_01833 | SAMEA3906486_00742 | Sulfate transport ATP-binding protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. | PUA domain (predicted RNA-binding domain). | 0.677 |
cysA_2 | cysD | SAMEA3906486_01833 | SAMEA3906486_01831 | Sulfate transport ATP-binding protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. | Sulfate adenylyltransferase subunit 2. | 0.993 |
cysA_2 | cysH | SAMEA3906486_01833 | SAMEA3906486_01832 | Sulfate transport ATP-binding protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. | Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. | 0.955 |
cysA_2 | cysI | SAMEA3906486_01833 | SAMEA3906486_01614 | Sulfate transport ATP-binding protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. | Sulfite reductase. | 0.885 |
cysA_2 | cysN | SAMEA3906486_01833 | SAMEA3906486_01830 | Sulfate transport ATP-binding protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. | Sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.993 |
cysA_2 | cysT | SAMEA3906486_01833 | SAMEA3906486_01835 | Sulfate transport ATP-binding protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. | Sulfate transport system permease; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.999 |
cysA_2 | cysW_1 | SAMEA3906486_01833 | SAMEA3906486_01834 | Sulfate transport ATP-binding protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. | Sulfate transport system permease. | 0.999 |
cysA_2 | modB_2 | SAMEA3906486_01833 | SAMEA3906486_01031 | Sulfate transport ATP-binding protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. | Binding-protein-dependent transport system%2C permease. | 0.948 |
cysA_2 | sbp | SAMEA3906486_01833 | SAMEA3906486_01836 | Sulfate transport ATP-binding protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. | Sulfate-binding protein. | 0.999 |
cysD | cysA_2 | SAMEA3906486_01831 | SAMEA3906486_01833 | Sulfate adenylyltransferase subunit 2. | Sulfate transport ATP-binding protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. | 0.993 |
cysD | cysH | SAMEA3906486_01831 | SAMEA3906486_01832 | Sulfate adenylyltransferase subunit 2. | Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. | 0.999 |
cysD | cysI | SAMEA3906486_01831 | SAMEA3906486_01614 | Sulfate adenylyltransferase subunit 2. | Sulfite reductase. | 0.977 |
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