Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SAI68590.1 | SAI68592.1 | SAMEA3906486_02086 | SAMEA3906486_02087 | Protein-disulfide isomerase. | Type IV secretory pathway%2C VirB4 components. | 0.933 |
SAI68590.1 | SAI68593.1 | SAMEA3906486_02086 | SAMEA3906486_02088 | Protein-disulfide isomerase. | Lipoprotein. | 0.932 |
SAI68590.1 | SAI68595.1 | SAMEA3906486_02086 | SAMEA3906486_02089 | Protein-disulfide isomerase. | Uncharacterized protein conserved in bacteria with the myosin-like domain. | 0.935 |
SAI68590.1 | SAI68597.1 | SAMEA3906486_02086 | SAMEA3906486_02090 | Protein-disulfide isomerase. | Secreted protein. | 0.935 |
SAI68590.1 | SAI68598.1 | SAMEA3906486_02086 | SAMEA3906486_02091 | Protein-disulfide isomerase. | Integrating conjugative element protein%2C PFL_4703 family. | 0.927 |
SAI68590.1 | SAI68605.1 | SAMEA3906486_02086 | SAMEA3906486_02095 | Protein-disulfide isomerase. | Integrative conjugative element protein%2C RAQPRD family. | 0.928 |
SAI68590.1 | SAI68607.1 | SAMEA3906486_02086 | SAMEA3906486_02096 | Protein-disulfide isomerase. | Membrane protein. | 0.840 |
SAI68590.1 | SAI68608.1 | SAMEA3906486_02086 | SAMEA3906486_02097 | Protein-disulfide isomerase. | Plasmid-transfer-protein. | 0.765 |
SAI68590.1 | SAI69007.1 | SAMEA3906486_02086 | SAMEA3906486_02235 | Protein-disulfide isomerase. | Type IV secretion system ATPase VirB4. | 0.749 |
SAI68590.1 | SAI69010.1 | SAMEA3906486_02086 | SAMEA3906486_02237 | Protein-disulfide isomerase. | Integrating conjugative element protein%2C PFL_4705 family. | 0.763 |
SAI68592.1 | SAI68590.1 | SAMEA3906486_02087 | SAMEA3906486_02086 | Type IV secretory pathway%2C VirB4 components. | Protein-disulfide isomerase. | 0.933 |
SAI68592.1 | SAI68593.1 | SAMEA3906486_02087 | SAMEA3906486_02088 | Type IV secretory pathway%2C VirB4 components. | Lipoprotein. | 0.950 |
SAI68592.1 | SAI68595.1 | SAMEA3906486_02087 | SAMEA3906486_02089 | Type IV secretory pathway%2C VirB4 components. | Uncharacterized protein conserved in bacteria with the myosin-like domain. | 0.950 |
SAI68592.1 | SAI68597.1 | SAMEA3906486_02087 | SAMEA3906486_02090 | Type IV secretory pathway%2C VirB4 components. | Secreted protein. | 0.950 |
SAI68592.1 | SAI68598.1 | SAMEA3906486_02087 | SAMEA3906486_02091 | Type IV secretory pathway%2C VirB4 components. | Integrating conjugative element protein%2C PFL_4703 family. | 0.950 |
SAI68592.1 | SAI68605.1 | SAMEA3906486_02087 | SAMEA3906486_02095 | Type IV secretory pathway%2C VirB4 components. | Integrative conjugative element protein%2C RAQPRD family. | 0.935 |
SAI68592.1 | SAI68607.1 | SAMEA3906486_02087 | SAMEA3906486_02096 | Type IV secretory pathway%2C VirB4 components. | Membrane protein. | 0.883 |
SAI68592.1 | SAI68608.1 | SAMEA3906486_02087 | SAMEA3906486_02097 | Type IV secretory pathway%2C VirB4 components. | Plasmid-transfer-protein. | 0.884 |
SAI68592.1 | SAI69010.1 | SAMEA3906486_02087 | SAMEA3906486_02237 | Type IV secretory pathway%2C VirB4 components. | Integrating conjugative element protein%2C PFL_4705 family. | 0.790 |
SAI68593.1 | SAI68590.1 | SAMEA3906486_02088 | SAMEA3906486_02086 | Lipoprotein. | Protein-disulfide isomerase. | 0.932 |
page 1 of 6