Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SAI65724.1 | SAI67677.1 | SAMEA3906486_00476 | SAMEA3906486_01651 | Probable 5'-nucleotidase precursor; Belongs to the 5'-nucleotidase family. | 5'(3')-deoxyribonucleotidase. | 0.844 |
SAI65724.1 | nudC | SAMEA3906486_00476 | SAMEA3906486_02294 | Probable 5'-nucleotidase precursor; Belongs to the 5'-nucleotidase family. | NADH pyrophosphatase. | 0.810 |
SAI65724.1 | pncB_1 | SAMEA3906486_00476 | SAMEA3906486_00836 | Probable 5'-nucleotidase precursor; Belongs to the 5'-nucleotidase family. | Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family. | 0.699 |
SAI65724.1 | surE | SAMEA3906486_00476 | SAMEA3906486_05387 | Probable 5'-nucleotidase precursor; Belongs to the 5'-nucleotidase family. | Stationary-phase survival protein; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.836 |
SAI65724.1 | ygaD | SAMEA3906486_00476 | SAMEA3906486_02633 | Probable 5'-nucleotidase precursor; Belongs to the 5'-nucleotidase family. | Competence/damage inducible protein CinA; Belongs to the CinA family. | 0.805 |
SAI67677.1 | SAI65724.1 | SAMEA3906486_01651 | SAMEA3906486_00476 | 5'(3')-deoxyribonucleotidase. | Probable 5'-nucleotidase precursor; Belongs to the 5'-nucleotidase family. | 0.844 |
SAI67677.1 | nadC | SAMEA3906486_01651 | SAMEA3906486_04547 | 5'(3')-deoxyribonucleotidase. | Nicotinate-nucleotide pyrophosphorylase; Belongs to the NadC/ModD family. | 0.915 |
SAI67677.1 | nudC | SAMEA3906486_01651 | SAMEA3906486_02294 | 5'(3')-deoxyribonucleotidase. | NADH pyrophosphatase. | 0.935 |
SAI67677.1 | ygaD | SAMEA3906486_01651 | SAMEA3906486_02633 | 5'(3')-deoxyribonucleotidase. | Competence/damage inducible protein CinA; Belongs to the CinA family. | 0.905 |
cobB | nadD | SAMEA3906486_03543 | SAMEA3906486_04996 | NAD-dependent deacetylase; Belongs to the sirtuin family. Class III subfamily. | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.871 |
cobB | nadE_2 | SAMEA3906486_03543 | SAMEA3906486_03518 | NAD-dependent deacetylase; Belongs to the sirtuin family. Class III subfamily. | NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.839 |
cobB | nudC | SAMEA3906486_03543 | SAMEA3906486_02294 | NAD-dependent deacetylase; Belongs to the sirtuin family. Class III subfamily. | NADH pyrophosphatase. | 0.806 |
cobB | pncB_1 | SAMEA3906486_03543 | SAMEA3906486_00836 | NAD-dependent deacetylase; Belongs to the sirtuin family. Class III subfamily. | Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family. | 0.570 |
cobB | ppnK | SAMEA3906486_03543 | SAMEA3906486_02153 | NAD-dependent deacetylase; Belongs to the sirtuin family. Class III subfamily. | Inorganic polyphosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.840 |
cobB | ygaD | SAMEA3906486_03543 | SAMEA3906486_02633 | NAD-dependent deacetylase; Belongs to the sirtuin family. Class III subfamily. | Competence/damage inducible protein CinA; Belongs to the CinA family. | 0.555 |
nadC | SAI67677.1 | SAMEA3906486_04547 | SAMEA3906486_01651 | Nicotinate-nucleotide pyrophosphorylase; Belongs to the NadC/ModD family. | 5'(3')-deoxyribonucleotidase. | 0.915 |
nadC | nadD | SAMEA3906486_04547 | SAMEA3906486_04996 | Nicotinate-nucleotide pyrophosphorylase; Belongs to the NadC/ModD family. | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.972 |
nadC | nadE_2 | SAMEA3906486_04547 | SAMEA3906486_03518 | Nicotinate-nucleotide pyrophosphorylase; Belongs to the NadC/ModD family. | NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.849 |
nadC | nudC | SAMEA3906486_04547 | SAMEA3906486_02294 | Nicotinate-nucleotide pyrophosphorylase; Belongs to the NadC/ModD family. | NADH pyrophosphatase. | 0.907 |
nadC | pncB_1 | SAMEA3906486_04547 | SAMEA3906486_00836 | Nicotinate-nucleotide pyrophosphorylase; Belongs to the NadC/ModD family. | Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family. | 0.895 |
page 1 of 4