Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SAI69201.1 | fic_1 | SAMEA3906486_02359 | SAMEA3906486_02358 | Uncharacterised protein. | Probable adenosine monophosphate-protein transferase fic. | 0.773 |
SAI69201.1 | rmlB | SAMEA3906486_02359 | SAMEA3906486_02357 | Uncharacterised protein. | NADH dehydrogenase. | 0.539 |
SAI69201.1 | ruvB | SAMEA3906486_02359 | SAMEA3906486_02361 | Uncharacterised protein. | Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.420 |
SAI69201.1 | tdcB_1 | SAMEA3906486_02359 | SAMEA3906486_02360 | Uncharacterised protein. | Serine/threonine dehydratase. | 0.588 |
fic_1 | SAI69201.1 | SAMEA3906486_02358 | SAMEA3906486_02359 | Probable adenosine monophosphate-protein transferase fic. | Uncharacterised protein. | 0.773 |
fic_1 | rmlB | SAMEA3906486_02358 | SAMEA3906486_02357 | Probable adenosine monophosphate-protein transferase fic. | NADH dehydrogenase. | 0.539 |
fic_1 | ruvB | SAMEA3906486_02358 | SAMEA3906486_02361 | Probable adenosine monophosphate-protein transferase fic. | Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.420 |
fic_1 | tdcB_1 | SAMEA3906486_02358 | SAMEA3906486_02360 | Probable adenosine monophosphate-protein transferase fic. | Serine/threonine dehydratase. | 0.588 |
rmlB | SAI69201.1 | SAMEA3906486_02357 | SAMEA3906486_02359 | NADH dehydrogenase. | Uncharacterised protein. | 0.539 |
rmlB | fic_1 | SAMEA3906486_02357 | SAMEA3906486_02358 | NADH dehydrogenase. | Probable adenosine monophosphate-protein transferase fic. | 0.539 |
rmlB | tdcB_1 | SAMEA3906486_02357 | SAMEA3906486_02360 | NADH dehydrogenase. | Serine/threonine dehydratase. | 0.432 |
ruvB | SAI69201.1 | SAMEA3906486_02361 | SAMEA3906486_02359 | Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | Uncharacterised protein. | 0.420 |
ruvB | fic_1 | SAMEA3906486_02361 | SAMEA3906486_02358 | Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | Probable adenosine monophosphate-protein transferase fic. | 0.420 |
ruvB | tdcB_1 | SAMEA3906486_02361 | SAMEA3906486_02360 | Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | Serine/threonine dehydratase. | 0.545 |
tdcB_1 | SAI69201.1 | SAMEA3906486_02360 | SAMEA3906486_02359 | Serine/threonine dehydratase. | Uncharacterised protein. | 0.588 |
tdcB_1 | fic_1 | SAMEA3906486_02360 | SAMEA3906486_02358 | Serine/threonine dehydratase. | Probable adenosine monophosphate-protein transferase fic. | 0.588 |
tdcB_1 | rmlB | SAMEA3906486_02360 | SAMEA3906486_02357 | Serine/threonine dehydratase. | NADH dehydrogenase. | 0.432 |
tdcB_1 | ruvB | SAMEA3906486_02360 | SAMEA3906486_02361 | Serine/threonine dehydratase. | Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.545 |