STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAI69348.1Uncharacterized proteins%2C LmbE homologs. (237 aa)    
Predicted Functional Partners:
menG2_3
Dimethylmenaquinone methyltransferase.
 
  
 0.801
proA_2
Aldolase.
 
  
 0.796
menG2_2
Dimethylmenaquinone methyltransferase.
 
  
 0.794
mii_3
3-methylitaconate isomerase.
 
  
 0.766
SAI70435.1
Prephenate dehydrogenase.
 
     0.702
proA_1
Aldolase.
 
  
 0.687
mii_2
3-methylitaconate isomerase.
 
  
 0.673
menG2_4
Dimethylmenaquinone methyltransferase.
 
  
 0.667
menG2_6
Dimethylmenaquinone methyltransferase.
 
  
 0.641
menG2_5
Dimethylmenaquinone methyltransferase.
 
  
 0.627
Your Current Organism:
Bordetella ansorpii
NCBI taxonomy Id: 288768
Other names: B. ansorpii, strain SMC-8986
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.