Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
accA1 | allR_2 | SAMEA3906486_02388 | SAMEA3906486_01021 | Urea amidolyase. | IclR family transcriptional regulator. | 0.883 |
accA1 | iclR_1 | SAMEA3906486_02388 | SAMEA3906486_00362 | Urea amidolyase. | Transcriptional regulator. | 0.883 |
accA1 | iclR_3 | SAMEA3906486_02388 | SAMEA3906486_01224 | Urea amidolyase. | IclR family transcriptional regulator. | 0.883 |
accA1 | iclR_6 | SAMEA3906486_02388 | SAMEA3906486_05247 | Urea amidolyase. | IclR family transcriptional regulator. | 0.883 |
accA1 | kdgR_1 | SAMEA3906486_02388 | SAMEA3906486_00644 | Urea amidolyase. | IclR family transcriptional regulator. | 0.883 |
accA1 | kdgR_2 | SAMEA3906486_02388 | SAMEA3906486_00815 | Urea amidolyase. | Transcriptional regulator. | 0.883 |
accA1 | kdgR_6 | SAMEA3906486_02388 | SAMEA3906486_03240 | Urea amidolyase. | IclR family transcriptional regulator. | 0.883 |
accA1 | kdgR_8 | SAMEA3906486_02388 | SAMEA3906486_05035 | Urea amidolyase. | IclR family transcriptional regulator. | 0.883 |
accA1 | srpS | SAMEA3906486_02388 | SAMEA3906486_02992 | Urea amidolyase. | IclR family transcriptional regulator. | 0.883 |
accA1 | yiaJ | SAMEA3906486_02388 | SAMEA3906486_02443 | Urea amidolyase. | Transcriptional regulator. | 0.883 |
allR_2 | accA1 | SAMEA3906486_01021 | SAMEA3906486_02388 | IclR family transcriptional regulator. | Urea amidolyase. | 0.883 |
allR_2 | iclR_1 | SAMEA3906486_01021 | SAMEA3906486_00362 | IclR family transcriptional regulator. | Transcriptional regulator. | 0.773 |
allR_2 | iclR_6 | SAMEA3906486_01021 | SAMEA3906486_05247 | IclR family transcriptional regulator. | IclR family transcriptional regulator. | 0.770 |
allR_2 | kdgR_2 | SAMEA3906486_01021 | SAMEA3906486_00815 | IclR family transcriptional regulator. | Transcriptional regulator. | 0.768 |
allR_2 | kdgR_6 | SAMEA3906486_01021 | SAMEA3906486_03240 | IclR family transcriptional regulator. | IclR family transcriptional regulator. | 0.773 |
allR_2 | srpS | SAMEA3906486_01021 | SAMEA3906486_02992 | IclR family transcriptional regulator. | IclR family transcriptional regulator. | 0.770 |
allR_2 | yiaJ | SAMEA3906486_01021 | SAMEA3906486_02443 | IclR family transcriptional regulator. | Transcriptional regulator. | 0.730 |
iclR_1 | accA1 | SAMEA3906486_00362 | SAMEA3906486_02388 | Transcriptional regulator. | Urea amidolyase. | 0.883 |
iclR_1 | allR_2 | SAMEA3906486_00362 | SAMEA3906486_01021 | Transcriptional regulator. | IclR family transcriptional regulator. | 0.773 |
iclR_1 | kdgR_1 | SAMEA3906486_00362 | SAMEA3906486_00644 | Transcriptional regulator. | IclR family transcriptional regulator. | 0.774 |
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