STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fabG_17Short chain dehydrogenase. (261 aa)    
Predicted Functional Partners:
aspC_2
Aminotransferase.
 
 
  0.870
wcbR
Polyketide synthase.
  
 0.857
SAI70054.1
Hydrolase.
 
 
  0.842
thcB
Oxidoreductase; Belongs to the cytochrome P450 family.
   
 0.810
ndoR
CDP-6-deoxy-delta-3%2C4-glucoseen reductase.
  
 0.797
fabF
3-oxoacyl-(acyl carrier protein) synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
  
 0.796
fabG_24
Short-chain dehydrogenase.
  
     0.756
fabG_32
3-ketoacyl-(acyl-carrier-protein) reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.747
fabG_15
Short-chain dehydrogenase/reductase.
  
     0.744
entA_2
Short-chain dehydrogenase/reductase.
  
     0.744
Your Current Organism:
Bordetella ansorpii
NCBI taxonomy Id: 288768
Other names: B. ansorpii, strain SMC-8986
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.