Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SAI69413.1 | SAI71635.1 | SAMEA3906486_02479 | SAMEA3906486_03657 | Two-component hyrid sensor and regulator. | Two-component hyrid sensor and regulator. | 0.999 |
SAI69413.1 | fixL_3 | SAMEA3906486_02479 | SAMEA3906486_04949 | Two-component hyrid sensor and regulator. | Serine/threonine kinase. | 0.999 |
SAI69413.1 | ndk | SAMEA3906486_02479 | SAMEA3906486_03917 | Two-component hyrid sensor and regulator. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.932 |
SAI69413.1 | rcsC_1 | SAMEA3906486_02479 | SAMEA3906486_03211 | Two-component hyrid sensor and regulator. | Two component sensor kinase for capsular biosynthesis. | 0.999 |
SAI69413.1 | ribA | SAMEA3906486_02479 | SAMEA3906486_03280 | Two-component hyrid sensor and regulator. | GTP cyclohydrolase-2. | 0.825 |
SAI69413.1 | ribB_1 | SAMEA3906486_02479 | SAMEA3906486_01040 | Two-component hyrid sensor and regulator. | 3%2C4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate. | 0.822 |
SAI69413.1 | ribB_2 | SAMEA3906486_02479 | SAMEA3906486_02638 | Two-component hyrid sensor and regulator. | 3%2C4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.937 |
SAI69413.1 | ribD | SAMEA3906486_02479 | SAMEA3906486_04343 | Two-component hyrid sensor and regulator. | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.597 |
SAI71635.1 | SAI69413.1 | SAMEA3906486_03657 | SAMEA3906486_02479 | Two-component hyrid sensor and regulator. | Two-component hyrid sensor and regulator. | 0.999 |
SAI71635.1 | fixL_3 | SAMEA3906486_03657 | SAMEA3906486_04949 | Two-component hyrid sensor and regulator. | Serine/threonine kinase. | 0.999 |
SAI71635.1 | ndk | SAMEA3906486_03657 | SAMEA3906486_03917 | Two-component hyrid sensor and regulator. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.932 |
SAI71635.1 | rcsC_1 | SAMEA3906486_03657 | SAMEA3906486_03211 | Two-component hyrid sensor and regulator. | Two component sensor kinase for capsular biosynthesis. | 0.999 |
SAI71635.1 | ribA | SAMEA3906486_03657 | SAMEA3906486_03280 | Two-component hyrid sensor and regulator. | GTP cyclohydrolase-2. | 0.825 |
SAI71635.1 | ribB_1 | SAMEA3906486_03657 | SAMEA3906486_01040 | Two-component hyrid sensor and regulator. | 3%2C4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate. | 0.822 |
SAI71635.1 | ribB_2 | SAMEA3906486_03657 | SAMEA3906486_02638 | Two-component hyrid sensor and regulator. | 3%2C4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.937 |
SAI71635.1 | ribD | SAMEA3906486_03657 | SAMEA3906486_04343 | Two-component hyrid sensor and regulator. | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.597 |
fixL_3 | SAI69413.1 | SAMEA3906486_04949 | SAMEA3906486_02479 | Serine/threonine kinase. | Two-component hyrid sensor and regulator. | 0.999 |
fixL_3 | SAI71635.1 | SAMEA3906486_04949 | SAMEA3906486_03657 | Serine/threonine kinase. | Two-component hyrid sensor and regulator. | 0.999 |
fixL_3 | ndk | SAMEA3906486_04949 | SAMEA3906486_03917 | Serine/threonine kinase. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.833 |
fixL_3 | rcsC_1 | SAMEA3906486_04949 | SAMEA3906486_03211 | Serine/threonine kinase. | Two component sensor kinase for capsular biosynthesis. | 0.999 |
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