STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dan_1N-acyl-D-amino-acid deacylase. (484 aa)    
Predicted Functional Partners:
SAI71035.1
Carbon-nitrogen hydrolase.
       0.773
SAI71047.1
Peptidase; Involved in peptidolytic degradation of cyclic heptapeptide hepatotoxin microcystin (MC); Belongs to the peptidase M81 family.
 
     0.611
appF_3
Oligopeptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
       0.601
gsiD_5
ABC transporter permease.
       0.597
gsiA_14
Oligopeptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
       0.590
gsiC_9
ABC transporter permease.
       0.590
SAI71034.1
Transcriptional regulator.
       0.581
gsiB_8
ABC transporter substrate-binding protein.
       0.561
yabJ_2
Endoribonuclease.
       0.447
pyrD
Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
    
  0.420
Your Current Organism:
Bordetella ansorpii
NCBI taxonomy Id: 288768
Other names: B. ansorpii, strain SMC-8986
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